Evidence map›Paper›PMID 17069636›Full record

ArticleInsect molecular biology2006

Comparative analysis of serine protease-related genes in the honey bee genome: possible involvement in embryonic development and innate immunity.

Z Zou, Dawn L Lopez, Michael R Kanost, Jay D Evans, Haobo Jiang

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Insect molecular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 195 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Climate change-induced stress in the honey beeFrontiers in physiology · 2025
    Review
  7. Article
  8. Article
  9. Type VI secretion systems promote intraspecific competition and host interactions in a bee gut symbiont.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. The Set of Serine Peptidases of theInternational journal of molecular sciences · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. A Genome-Wide Analysis of Serine Protease Inhibitors inInternational journal of molecular sciences · 2023
    Article
  15. The Chromosome-Level Genome Assembly of Bean Blossom Thrips (International journal of molecular sciences · 2023
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Z ZouDepartment of Entomology and Plant Pathology, Oklahoma State University, Stillwater, USA.
Dawn L Lopez
Michael R Kanost
Jay D Evans
Haobo Jiang
Honey Bee Breeding, Genetics, and Physiology Laboratory · USOklahoma State University · USKansas State University · US

Funding

Initiation and Regulation of Prophenoloxidase ActivationR01GM058634 · NIGMS · OKLAHOMA STATE UNIVERSITY STILLWATER · PI JIANG, HAOBO · 1999 to 2022
$4.0M
Supplement 2 to promote diversity in health related res.: protease systems in insR37GM041247 · NIGMS · KANSAS STATE UNIVERSITY · PI KANOST, MICHAEL R · 2011 to 2020
$3.8M
SERINE PROTEINASE INHIBITORS IN INSECTSR01GM041247 · NIGMS · KANSAS STATE UNIVERSITY · PI KANOST, MICHAEL R · 1994 to 2010
$3.1M
SERINE PROTEINASE INHIBITORS IN INSECTSR29GM041247 · NIGMS · UNIVERSITY OF ARIZONA · PI KANOST, MICHAEL R. · 1989 to 1993
–
NIGMS NIH HHS GM41247NIGMS NIH HHS GM58634NIGMS NIH HHS R01 GM041247NIGMS NIH HHS R01 GM058634NIGMS NIH HHS R37 GM041247
6 · The paper itself

Abstract

We have identified 44 serine protease (SP) and 13 serine protease homolog (SPH) genes in the genome of Apis mellifera. Most of these genes encode putative secreted proteins, but four SPs and three SPHs may associate with the plasma membrane via a transmembrane region. Clip domains represent the most abundant non-catalytic structural units in these SP-like proteins -12 SPs and six SPHs contain at least one clip domain. Some of the family members contain other modules for protein-protein interactions, including disulphide-stabilized structures (LDL(r)A, SRCR, frizzled, kringle, Sushi, Wonton and Pan/apple), carbohydrate-recognition domains (C-type lectin and chitin-binding), and other modules (such as zinc finger, CUB, coiled coil and Sina). Comparison of the sequences with those from Drosophila led to a proposed SP pathway for establishing the dorsoventral axis of honey bee embryos. Multiple sequence alignments revealed evolutionary relationships of honey bee SPs and SPHs with those in Drosophila melanogaster, Anopheles gambiae, and Manduca sexta. We identified homologs of D. melanogaster persephone, M. sexta HP14, PAP-1 and SPH-1. A. mellifera genome includes at least five genes for potential SP inhibitors (serpin-1 through -5) and three genes of SP putative substrates (prophenoloxidase, spätzle-1 and spätzle-2). Quantitative RT-PCR analyses showed an elevation in the mRNA levels of SP2, SP3, SP9, SP10, SPH41, SPH42, SP49, serpin-2, serpin-4, serpin-5, and spätzle-2 in adults after a microbial challenge. The SP41 and SP6 transcripts significantly increased after an injection of Paenibacillus larva, but there was no such increase after injection of saline or Escherichia coli. mRNA levels of most SPs and serpins significantly increased by 48 h after the pathogen infection in 1st instar larvae. On the contrary, SP1, SP3, SP19 and serpin-5 transcript levels reduced. These results, taken together, provide a framework for designing experimental studies of the roles of SPs and related proteins in embryonic development and immune responses of A. mellifera.

Indexed as

Amino Acid SequenceAnimalsBeesEmbryonic DevelopmentGene ExpressionGenome, InsectImmunity, InnateInsect ProteinsMolecular Sequence DataMultigene FamilyPancreatitis-Associated ProteinsProtein Structure, TertiarySequence AlignmentSerine EndopeptidasesSerpinsSignal TransductionInsect ProteinsPancreatitis-Associated ProteinsREG3A protein, humanSerine EndopeptidasesSerpins

Identifiers

PMID17069636
PMCPMC1761132
OpenAlexW2034137698

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.