Evidence map›Paper›PMID 17064408›Full record

ArticleGenome biology2006

Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors.

Etsuko N Moriyama, Pooja K Strope, Stephen O Opiyo, Zhongying Chen, Alan M Jones

Abstract read
In one paragraph

Article in Genome biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Article
  2. Article
  3. Identification ofInternational journal of molecular sciences · 2023
    Article
  4. Life, death and resurrection of plant GPCRs.Plant molecular biology · 2023
    Review
  5. Article
  6. Article
  7. Heterotrimeric G Proteins in Plants: Canonical and Atypical Gα Subunits.International journal of molecular sciences · 2021
    Review
  8. Systematic Genome-Wide Study and Expression Analysis ofInternational journal of molecular sciences · 2021
    Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Heterotrimeric G protein-coupled signaling in plants.Annual review of plant biology · 2014
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Etsuko N MoriyamaSchool of Biological Sciences and Plant Science Initiative, University of Nebraska-Lincoln, Lincoln, NE 68588-0660, USA. emoriyama2@unl.edu
Pooja K Strope
Stephen O Opiyo
Zhongying Chen
Alan M Jones

Funding

Novel Mechanisms Regulating the Heterotrimeric G Protein ComplexR01GM065989 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JONES, ALAN M. · 2002 to 2023
$5.5M
NIGMS NIH HHS GM65989-01NIGMS NIH HHS R01 GM065989
6 · The paper itself

Abstract

To identify divergent seven-transmembrane receptor (7TMR) candidates from the Arabidopsis thaliana genome, multiple protein classification methods were combined, including both alignment-based and alignment-free classifiers. This resolved problems in optimally training individual classifiers using limited and divergent samples, and increased stringency for candidate proteins. We identified 394 proteins as 7TMR candidates and highlighted 54 with corresponding expression patterns for further investigation.

Indexed as

Genetic VariationGenome, PlantArabidopsisArabidopsis ProteinsDatabases, ProteinGene Expression ProfilingGenetic VectorsMarkov ChainsReceptors, Cell SurfaceArabidopsis ProteinsReceptors, Cell Surface

Identifiers

PMID17064408
PMCPMC1794564

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.