Evidence map›Paper›PMID 17061125›Full record

ArticleMolecular genetics and genomics : MGG2007

Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response.

Dong Ju Lee, Jin-Young Park, Su-Jin Ku, Young-Min Ha, Sunmi Kim, Myung Duk Kim, Man-Ho Oh, Jungmook Kim

Abstract read
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In one paragraph

Article in Molecular genetics and genomics : MGG, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 2 pooled it
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 2 syntheses or guidelines pooled it, 127 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
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  6. Article
  7. Review
  8. Article
  9. Cloning and Functional Analysis of thePlants (Basel, Switzerland) · 2023
    Article
  10. Annotation of thePlants (Basel, Switzerland) · 2023
    Article
  11. International journal of molecular sciences · 2022
    Article
  12. Article
  13. Cytokinin-Controlled Gradient Distribution of Auxin inInternational journal of molecular sciences · 2021
    Review
  14. Cytokinin Type-B Response Regulators Promote Bulbil Initiation inInternational journal of molecular sciences · 2021
    Article
  15. Article
  16. Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Dong Ju LeeDepartment of Plant Biotechnology and Agricultural Plant Stress Research Center, Chonnam National University, Puk-Gu, Gwangju, 500-757, South Korea.
Jin-Young Park
Su-Jin Ku
Young-Min Ha
Sunmi Kim
Myung Duk Kim
Man-Ho Oh
Jungmook Kim
Chonnam National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The type-A ARRs of cytokinin two-component signaling system act as negative regulators for cytokinin signaling except for ARR4, but the molecular mechanism by which the A-type ARRs regulate cytokinin signaling remain elusive. To get insights into the molecular function of A-type ARR in cytokinin response, we sought to find the components that function downstream of A-type ARR protein by investigating the effects of ARR7 overexpression on cytokinin-regulated gene expression with the Affymetrix full genome array. To examine early cytokinin response, plants were treated with cytokinin for 30 min or 2 h, followed by GeneChip analysis. The hierarchical clustering analysis of our GeneChip data showed that ARR7 overexpression had distinctively repressive impacts on various groups of the cytokinin-regulated genes. In particular, the induction of all A-type ARRs except for ARR22, and AHK(ARABIDOPSIS HISTIDINE KINASE)1 and AHK4 was suppressed by ARR7. Cytokinin-induced expression of most of 12 expansin genes were repressed by ARR7, indicating potential involvement of ARR7 in cell expansion and plant development. Up-regulation of five cytokinin oxidase genes by cytokinins was negatively affected by ARR7. Our GeneChip analysis suggest that ARR7 mainly acts as a transcriptional repressor for a variety of early cytokinin-regulated genes encoding transcription factors, signal transmitters, plant development, and cellular metabolism, which may be responsible for reduced sensitivity of Arabidopsis transgenic plants overexpressing ARR7 to exogenous cytokinins.

Indexed as

Gene Expression ProfilingTransfectionArabidopsisArabidopsis ProteinsCytokininsDNA-Binding ProteinsDrug ResistanceGene Expression Regulation, PlantGenome, PlantOligonucleotide Array Sequence AnalysisPlants, Genetically ModifiedSignal TransductionTranscription FactorsTranscription, GeneticArabidopsis ProteinsARR7 protein, ArabidopsisCytokininsDNA-Binding ProteinsTranscription Factors

Identifiers

PMID17061125
OpenAlexW2096879509

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.