Evidence map›Paper›PMID 17061120›Full record

ArticlePflugers Archiv : European journal of physiology2007

Intra- and interindividual variation in gene expression in human adipose tissue.

Esther A van Beek, Arjen H Bakker, Philip M Kruyt, Marten H Hofker, Wim H Saris, Jaap Keijer

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In one paragraph

Article in Pflugers Archiv : European journal of physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  3. Beyond the bone: Bone morphogenetic protein signaling in adipose tissue.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Esther A van BeekBioactives group, RIKILT- Institute of Food Safety, Wageningen, Wageningen, The Netherlands.
Arjen H Bakker
Philip M Kruyt
Marten H Hofker
Wim H Saris
Jaap Keijer
Maastricht University · NLWageningen University & Research · NLZiekenhuis Gelderse Vallei · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adipose tissue is a highly plastic tissue with an important endocrine and metabolic function. To understand its role in human health and disease, it is necessary to understand the extent of variation and the specific differences within and between different depots and subjects. We employed cDNA microarray analysis to investigate this in human subjects ranging from lean to mildly obese. We observe (1) high similarity between different samples of one adipose depot, (2) only small differences between the subcutaneous and visceral adipose tissue depot and (3) larger differences in gene expression between different individuals (per depot). The major variation within adipose depots can be attributed to differences in the non-adipocyte component of adipose tissue. Using only non-obese subjects, we identified genes that were consistently differentially expressed between subcutaneous and omental adipose tissue, despite the variation in gene expression between these subjects. Using quantitative real time polymerase chain reaction (PCR), fatty acid binding protein 4 (FABP4), vimentin (Vim), four and a half LIMs domains (FHL1), CD36 (all higher in subcutaneous adipose tissue) and Matrix Gla protein (MGP; lower in subcutaneous adipose tissue) were confirmed to be significantly differentially expressed between depots.

Indexed as

Gene Expression ProfilingGenetic VariationOligonucleotide Array Sequence AnalysisCalcium-Binding ProteinsCD36 AntigensExtracellular Matrix ProteinsFatty Acid-Binding ProteinsFemaleHumansIntracellular Signaling Peptides and ProteinsLIM Domain ProteinsMaleMatrix Gla ProteinMiddle AgedMuscle ProteinsOmentumCalcium-Binding ProteinsCD36 AntigensExtracellular Matrix ProteinsFABP4 protein, humanFatty Acid-Binding ProteinsFHL1 protein, humanIntracellular Signaling Peptides and ProteinsLIM Domain ProteinsMatrix Gla ProteinMuscle ProteinsVimentin

Identifiers

PMID17061120
OpenAlexW2121880251

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.