Evidence map›Paper›PMID 1705882›Full record

ArticleThe EMBO journal1991

Evolution of immunoglobulin light chain genes: analysis of Xenopus IgL isotypes and their contribution to antibody diversity.

J Schwager, N Bürckert, M Schwager, M Wilson

Abstract readComparative Study
In one paragraph

Article in The EMBO journal, 1991. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. The immunoglobulins of cartilaginous fishes.Developmental and comparative immunology · 2021
    Review
  3. Review
  4. Frontiers in physiology · 2019
    Article
  5. A cold-blooded view of adaptive immunity.Nature reviews. Immunology · 2018
    Review
  6. Article
  7. Article
  8. Review
  9. Comparative and developmental study of the immune system in Xenopus.Developmental dynamics : an official publication of the American Association of Anatomists · 2009
    Review
  10. Article
  11. Evolutionary redefinition of immunoglobulin light chain isotypes in tetrapods using molecular markers.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  12. Article
  13. Article
  14. Article
  15. Composite exon structure of an unusual Ig lambda-like gene located at human 22q11 position.Mammalian genome : official journal of the International Mammalian Genome Society · 1996
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

J SchwagerBasel Institute for Immunology, Switzerland.
N Bürckert
M Schwager
M Wilson
Institute of Molecular and Clinical Ophthalmology Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The amphibian Xenopus laevis expresses several types of immunoglobulin light chain (IgL). cDNA clones for two IgL isotypes, C sigma 1 and C sigma 2, were analysed. C sigma is expressed in spleen and mitogen-stimulated B cells, like another Xenopus IgL type, termed C rho. C sigma shares less than 33% residues with C rho or with CL regions of shark, chicken and mammals. This suggests that C sigma diverged from a common ancestor of CL regions before or at the emergence of amphibians. Two families of VL elements, V sigma 1 and V sigma 2 are associated with C sigma (but not with C rho). They rearrange to their own set of JL elements, J sigma 1 and J sigma 2, which are poorly related to other J elements of the Ig gene family. The Xenopus genome contains a few V sigma 2 and multiple V sigma 1 elements (comparable with mammalian V kappa), but only two C sigma genes. Thus, the organization and expression of Xenopus IgL loci are apparently similar to mammalian IgL loci but different from shark and chicken IgL loci. Only a few VL elements are expressed, since cDNA clones show extensive sharing of CDR1 and CDR2 sequences; some clones differ only in CDR3. Rearranging VL and JL elements increases CDR3 diversity in both V sigma families, but abortive rearrangements are frequent in V sigma 1 regions. The very poor heterogeneity of expressed VL elements therefore appears to limit antibody diversity in Xenopus.

Indexed as

Biological EvolutionGenes, ImmunoglobulinAmino Acid SequenceAnimalsAntibody DiversityBase SequenceCloning, MolecularDNAGene LibraryImmunoblottingImmunoglobulin IsotypesImmunoglobulin Light ChainsMolecular Sequence DataPoly ARNARNA, MessengerDNAImmunoglobulin IsotypesImmunoglobulin Light ChainsPoly ARNARNA, Messenger

Identifiers

PMID1705882
PMCPMC452677
OpenAlexW147938112

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.