Evidence map›Paper›PMID 17048039›Full record

ArticleImmunogenetics2006

Sooty mangabey (Cercocebus torquatus atys) IGHG and IGHA genes.

Franco Scinicariello, Feda Masseoud, Lakshmi Jayashankar, Roberta Attanasio

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Franco ScinicarielloDepartment of Biology, Georgia State University, Atlanta, GA 30302, USA.
Feda Masseoud
Lakshmi Jayashankar
Roberta Attanasio
Georgia State University · US

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI ALTMAN, JOHN DAVID · 1985 to 2011
$114.0M
NIH MACAQUE RESOURCES--DEFINITION OF HUMORAL IMMUNITYR29RR010755 · NCRR · GEORGIA STATE UNIVERSITY · PI ATTANASIO, ROBERTA · 1997 to 2001
$202k
DEFINITION OF HUMORAL IMMUNITYR55RR010755 · NCRR · EMORY UNIVERSITY · PI ATTANASIO, ROBERTA · 1995 to 1995
–
NCRR NIH HHS RR00165NCRR NIH HHS RR10755
6 · The paper itself

Abstract

Antibodies are adaptor molecules of the immune system that link antigen recognition with the effector mechanisms responsible for antigen clearance. Several nonhuman primate species are widely used in biomedical research, especially for vaccine development and for AIDS-related studies. However, nonhuman primate antibody molecules have been characterized only partially and only in a few species. Here, we describe sooty mangabey (Cercocebus torquatus atys) IGHG and IGHA genes, which encode the heavy-chain constant region of IgG and IgA molecules, respectively. The four mangabey IGHG genes are highly homologous to the rhesus macaque and baboon IGHG genes (percent identity varies between 94.0 and 98.8, depending on the subclass), with most amino acid differences located in the hinge regions. Results obtained by real-time reverse transcription polymerase chain reaction show that the four IGHG genes are expressed at least at the mRNA level. The mangabey IGHA gene is highly homologous to the corresponding gene from rhesus macaques (percent identity ranges from 88.6 to 96.7, depending on the allele considered), the only other nonhominoid primate species for which the complete sequence of the IGHA gene is currently available. In the mangabey analyzed, two IGHA alleles are present, confirming that high levels of IGHA gene heterozygosity are present in monkey species. These results show that nonhuman primate gamma and alpha heavy chains differ from each other mostly at the level of the hinge region and that alpha sequence heterogeneity in nonhuman primate species is also present in other gamma regions. In addition, these results provide sequence information that can be used for residue frequency analysis of antibody heavy-chain constant region sequences.

Indexed as

Amino Acid SequenceAnimalsCercocebus atysGene ExpressionImmunoglobulin AImmunoglobulin GImmunoglobulin Heavy ChainsMolecular Sequence DataPhylogenySequence AlignmentImmunoglobulin AImmunoglobulin GImmunoglobulin Heavy Chains

Identifiers

PMID17048039
OpenAlexW1979274501

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.