Evidence map›Paper›PMID 17046045›Full record

ArticleVirology2007

Recombination in feline lentiviral genomes during experimental cross-species infection.

Mary Poss, Adam Idoine, Howard A Ross, Julie A Terwee, Sue VandeWoude, Allen Rodrigo

Open access · greenAbstract read
In one paragraph

Article in Virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Mary PossDivision of Biological Sciences, HS104, University of Montana, Missoula, MT 59812, USA. mary.poss@umontana.edu
Adam Idoine
Howard A Ross
Julie A Terwee
Sue VandeWoude
Allen Rodrigo
University of Auckland · NZColorado State University · USUniversity of Montana · US

Funding

Mechanisms of Feline Lentivirus Control and InterferenceR01AI052055 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI VANDEWOUDE, SUE · 2002 to 2005
$1.4M
NIAID NIH HHS AI052055NIAID NIH HHS R01 AI052055
6 · The paper itself

Abstract

Domestic cats develop an asymptomatic, productive infection with a feline immunodeficiency virus (PLV) derived from a naturally infected cougar (P. concolor). We previously demonstrated that there are extensive G to A substitutions, characteristic of host cytidine deaminase editing, and positive selection on reverse transcriptase in the PLV genome during this cross-species infection. In this study, we evaluated full-length viral genomes from each of four cats infected with PLV to determine if viral recombination occurred during this single source infection. Recombination rates were measurable in three of the four infected cats. In two of these animals, a single site in reverse transcriptase was under positive selection and there was significant topological incongruence among individual genes in the 3' half of the genomes. The break point was proximate to a splice site used for accessory gene expression. Our data indicate that recombination can facilitate lentivirus persistence in unfavorable environments such as a new host species.

Indexed as

Genome, ViralRecombination, GeneticAdaptation, BiologicalAnimalsBase SequenceCatsDisease Models, AnimalImmunodeficiency Virus, FelineLentivirus InfectionsMolecular Sequence DataMutationNucleic Acid ConformationRNA-Directed DNA PolymeraseSelection, GeneticSequence Homology, Nucleic AcidRNA-Directed DNA Polymerase

Identifiers

PMID17046045
PMCPMC1876777
OpenAlexW1975937892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.