Evidence map›Paper›PMID 17043236›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Distance measurements reveal a common topology of prokaryotic voltage-gated ion channels in the lipid bilayer.

Jessica Richardson, Rikard Blunck, Pinghua Ge, Paul R Selvin, Francisco Bezanilla, Diane M Papazian, Ana M Correa

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Small molecule modulation of voltage gated sodium channels.Current opinion in structural biology · 2017
    Review
  3. β1-subunit-induced structural rearrangements of the Ca2+- and voltage-activated K+ (BK) channel.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Paul F. Cranefield Award to Rikard Blunck.The Journal of general physiology · 2011
    Article
  12. Article
  13. Article
  14. Multi-scale electrophysiology modeling: from atom to organ.The Journal of general physiology · 2010
    Article
  15. The activated state of a sodium channel voltage sensor in a membrane environment.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  16. Fluorescence detection of the movement of single KcsA subunits reveals cooperativity.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jessica RichardsonDepartments of Anesthesiology and *Physiology, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA.
Rikard Blunck
Pinghua Ge
Paul R Selvin
Francisco Bezanilla
Diane M Papazian
Ana M Correa

Funding

The Electrophysiological Studies of Voltage Gated ChannelsR01GM030376 · NIGMS · UNIVERSITY OF CHICAGO · PI BEZANILLA, FRANCISCO J · 1985 to 2025
$9.1M
Voltage-Dependent Activation in K+ ChannelsR01GM043459 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PAPAZIAN, DIANE M · 1990 to 2014
$4.1M
ELECTROPHYSIOLOGICAL STUDIES OF VOLTAGE GATED CHANNELSR37GM030376 · NIGMS · UNIVERSITY OF CHICAGO · PI BEZANILLA, FRANCISCO J · 1999 to 2008
$3.7M
Voltage-Gating in Bacterial Ion ChannelsR01GM068044 · NIGMS · UNIVERSITY OF CHICAGO · PI CORREA, ANA M · 2004 to 2010
$1.8M
Fluorescence Changes in Shaker Potassium lon ChannelR01GM074770 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI SELVIN, PAUL R · 2005 to 2008
$1.3M
NIGMS NIH HHS GM30376NIGMS NIH HHS GM43459NIGMS NIH HHS GM68044NIGMS NIH HHS GM74770NIGMS NIH HHS R01 GM030376NIGMS NIH HHS R01 GM043459NIGMS NIH HHS R01 GM068044NIGMS NIH HHS R01 GM074770NIGMS NIH HHS R37 GM030376NINDS NIH HHS 1F31NS05302801
6 · The paper itself

Abstract

Voltage-dependent ion channels are fundamental to the physiology of excitable cells because they underlie the generation and propagation of the action potential and excitation-contraction coupling. To understand how ion channels work, it is important to determine their structures in different conformations in a membrane environment. The validity of the crystal structure for the prokaryotic K(+) channel, K(V)AP, has been questioned based on discrepancies with biophysical data from functional eukaryotic channels, underlining the need for independent structural data under native conditions. We investigated the structural organization of two prokaryotic voltage-gated channels, NaChBac and K(V)AP, in liposomes by using luminescence resonance energy transfer. We describe here a transmembrane packing representation of the voltage sensor and pore domains of the prokaryotic Na channel, NaChBac. We find that NaChBac and K(V)AP share a common arrangement in which the structures of the Na and K selective pores and voltage-sensor domains are conserved. The packing arrangement of the voltage-sensing region as determined by luminescence resonance energy transfer differs significantly from that of the K(V)AP crystal structure, but resembles that of the eukaryotic K(V)1.2 crystal structure. However, the voltage-sensor domain in prokaryotic channels is closer to the pore domain than in the K(V)1.2 structure. Our results indicate that prokaryotic and eukaryotic channels that share similar functional properties have similar helix arrangements, with differences arising likely from the later introduction of additional structural elements.

Indexed as

Ion Channel GatingBacterial ProteinsCalibrationLipid BilayersModels, MolecularMutationPotassium Channels, Voltage-GatedProkaryotic CellsSodium ChannelsBacterial ProteinsLipid BilayersNaChBac protein, bacteriaPotassium Channels, Voltage-GatedSodium Channels

Identifiers

PMID17043236
PMCPMC1635094

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.