Evidence map›Paper›PMID 17041187›Full record

ArticleEukaryotic cell2006

Skp1p regulates Soi3p/Rav1p association with endosomal membranes but is not required for vacuolar ATPase assembly.

E J Brace, Leah P Parkinson, Robert S Fuller

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Review
  3. Structure of yeast RAVE bound to a partial VProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. SkpA restrains synaptic terminal growth during development and promotes axonal degeneration following injury.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

E J BraceDepartment of Biological Chemistry, University of Michigan Medical Center, Ann Arbor, MI 48109-0606, USA.
Leah P Parkinson
Robert S Fuller
University of Michigan–Ann Arbor · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
Cellular Biotechnology Training Program (CBTP) - Years 31-35T32GM145304 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Guizhi Zhu · 2022 to 2026
$2.6M
GOLGI TARGETING AND RETENTION OF YEAST KEX2 PROTEASER01GM050915 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FULLER, ROBERTA S. · 1994 to 2009
$1.7M
SPECIFICITY AND STUCTURE--THE KEX2 AND FURIN PROTEASESR01GM039697 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FULLER, ROBERT S · 1988 to 2005
$1.3M
PROTEOLYTIC PROCESSING--PRECURSORS OF SECRETED PEPTIDER55GM039697 · NIGMS · STANFORD UNIVERSITY · PI FULLER, ROBERT S · 1992 to 1992
–
NCI NIH HHS P30 CA046592NCI NIH HHS P30 CA46592NIGMS NIH HHS GM39697NIGMS NIH HHS GM50915NIGMS NIH HHS R01 GM039697NIGMS NIH HHS R01 GM050915NIGMS NIH HHS T32 GM145304
6 · The paper itself

Abstract

Skp1p is an essential component of SCF-type E3 ubiquitin ligase complexes and associates with these through binding to F-box proteins. Skp1p also binds F-box proteins in a number of non-SCF complexes. The Skp1p-associated yeast protein Soi3p/Rav1p (hereafter referred to as Rav1p) is a component of the RAVE complex required for regulated assembly of vacuolar ATPase (V-ATPase). Rav1p is also involved in transport of TGN proteins and endocytic cargo between early and late endosomes. To evaluate the role of Skp1p in the RAVE complex, we made use of the fact that overexpression of Rav1p is toxic because it sequesters Skp1p from essential interactions. We isolated a separation of function allele of SKP1, skp1(Asn108Tyr), that completely abrogated the Rav1p interaction but allowed Skp1p to perform other essential cellular functions. Cells containing the skp1(Asn108Tyr) allele as the sole source of Skp1p exhibited normal V-ATPase assembly and activity. However, in the skp1(Asn108Tyr) mutant strain, the membrane-associated pool of Rav1-green fluorescent protein was increased, suggesting that Skp1p is important for the release of Rav1p from endosomal membranes where it functions in V-ATPase assembly. Thus, although part of the RAVE complex, Skp1p does not appear to be involved in V-ATPase assembly but instead in the cycling of the complex off membranes. This work also provides a generalizable approach to defining the roles of interactions of Skp1p with individual F-box proteins through the isolation of special alleles of SKP1.

Indexed as

Amino Acid SubstitutionEndosomesF-Box ProteinsGene ExpressionGenes, FungalMembrane ProteinsModels, MolecularMultiprotein ComplexesMutagenesis, Site-DirectedPlasmidsRecombinant Fusion ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSKP Cullin F-Box Protein LigasesVacuolar Proton-Translocating ATPasesF-Box ProteinsMembrane ProteinsMultiprotein ComplexesRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSKP1 protein, S cerevisiaeSKP Cullin F-Box Protein LigasesSoi3 protein, S cerevisiaeVacuolar Proton-Translocating ATPases

Identifiers

PMID17041187
PMCPMC1694809
OpenAlexW2107296516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.