Evidence map›Paper›PMID 17038436›Full record

ArticleThe Journal of physiology2007

The electrogenicity of the rat sodium-bicarbonate cotransporter NBCe1 requires interactions among transmembrane segments of the transporter.

Inyeong Choi, Han Soo Yang, Walter F Boron

Open access · greenAbstract read
In one paragraph

Article in The Journal of physiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Cation-coupled bicarbonate transporters.Comprehensive Physiology · 2014
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. SLC4A transporters.Current topics in membranes · 2012
    Article
  8. PSD-95 interacts with NBCn1 and enhances channel-like activity without affecting Na/HCO(3) cotransport.Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology · 2012
    Article
  9. Article
  10. Article
  11. Article
  12. Modular structure of sodium-coupled bicarbonate transporters.The Journal of experimental biology · 2009
    Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Inyeong ChoiDepartment of Physiology, Emory University School of Medicine, 615 Michael Street, Atlanta, GA 30322, USA. ichoi@emory.edu
Han Soo Yang
Walter F Boron
Emory University · USYale University · US

Funding

Physiology of Electrogenic Na/HCO3 CotransportersR37DK030344 · NIDDK · YALE UNIVERSITY · PI BORON, WALTER F · 2002 to 2011
$3.5M
REGULATION OF INTRACELLULAR PH IN RENAL PROXIMAL TUBULER01DK030344 · NIDDK · YALE UNIVERSITY · PI BORON, WALTER F. · 1986 to 2001
$660k
NIDDK NIH HHS DK30344NIDDK NIH HHS R01 DK030344NIDDK NIH HHS R37 DK030344
6 · The paper itself

Abstract

The electrogenic Na+-HCO3- cotransporter (NBCe1) plays a central role in intracellular pH (pHi) regulation as well as HCO3- secretion by pancreatic ducts and HCO3- reabsorption by renal proximal tubules. To understand the structural requirements for the electrogenicity of NBCe1, we constructed chimeras of NBCe1-A and the electroneutral NBCn1-B, and used two-electrode voltage clamp to measure electrogenic transporter current in Xenopus oocytes exposed to 5% CO2-26 mm HCO3- (pH 7.40). The chimera consisting of NBCe1-A (i.e. NBCe1-A 'background') with the cytoplasmic N-terminal domain (Nt) of NBCn1-B had a reversal potential of -156.3 mV (compared with a membrane potential Vm of -43.1 mV in a HCO3(-)-free solution) and a slope conductance of 3.0 microS (compared with 12.5 microS for NBCe1-A). Also electrogenic were chimeras with an NBCe1-A background but with NBCn1-B contributing the extracellular loop (L) between transmembrane segment (TM) 5 and 6 (-140.9 mV/11.1 microS), the cytoplasmic C-terminal domain (Ct; -123.8 mV/9.7 microS) or Nt + L + Ct (-120.9 mV/3.7 microS). Reciprocal chimeras (with an NBCn1 background but with NBCe1 contributing Nt, L, Ct or Nt + L + Ct) produced no measurable electrogenic transporter currents in the presence of CO2-HCO3-. pHi recovered from an acid load, but without the negative shift of Vm that is characteristic of electrogenic Na+-HCO3- cotransporters. Thus, these chimeras were electroneutral, as were two others consisting of NBCe1(Nt-L)/NBCn1(TM6-Ct) and NBCn1(Nt-L)/NBCe1(TM6-Ct). We propose that the electrogenicity of NBCe1 requires interactions between TM1-5 and TM6-13.

Indexed as

AnimalsBicarbonatesCytoplasmElectrophysiologyExtracellular SpaceHydrogen-Ion ConcentrationMembrane PotentialsMolecular Sequence DataMutant Chimeric ProteinsOocytesPatch-Clamp TechniquesRatsSodium-Bicarbonate SymportersXenopusBicarbonatesMutant Chimeric ProteinsSlc4a4 protein, ratSodium-Bicarbonate Symporters

Identifiers

PMID17038436
PMCPMC2075136
OpenAlexW1572665709

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.