Evidence map›Paper›PMID 17036050›Full record

ArticleThe EMBO journal2006

New p63 targets in keratinocytes identified by a genome-wide approach.

M Alessandra Viganò, Jérôme Lamartine, Barbara Testoni, Daniele Merico, Daniela Alotto, Carlotta Castagnoli, Amèlie Robert, Eleonora Candi, Gerry Melino, Xavier Gidrol and 1 more

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 106 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The Role of the p53 Protein in Stem-Cell Biology and Epigenetic Regulation.Cold Spring Harbor perspectives in medicine · 2016
    Review
  10. ΔNp63α attenuates tumor aggressiveness by suppressing miR-205/ZEB1-mediated epithelial-mesenchymal transition in cervical squamous cell carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. La FAM fatale: USP9X in development and disease.Cellular and molecular life sciences : CMLS · 2015
    Review
  18. Article
  19. Palatogenesis and cutaneous repair: A two-headed coin.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

M Alessandra ViganòDipartimento di Scienze Biomolecolari e Biotecnologie, Universita' di Milano, Milano, Italy. alessandra.vigano@guest.unimi.it
Jérôme Lamartine
Barbara Testoni
Daniele Merico
Daniela Alotto
Carlotta Castagnoli
Amèlie Robert
Eleonora Candi
Gerry Melino
Xavier Gidrol
Roberto Mantovani
University of Milan · ITGenopole (France) · FRUniversity of Rome Tor Vergata · IT

Funding

Medical Research Council MC_U132670600Telethon GGP02379
6 · The paper itself

Abstract

p63 is a developmentally regulated transcription factor related to p53. It is involved in the development of ectodermal tissues, including limb, skin and in general, multilayered epithelia. The DeltaNp63alpha isoform is thought to play a 'master' role in the asymmetric division of epithelial cells. It is also involved in the pathogenesis of several human diseases, phenotypically characterized by ectodermal dysplasia. Our understanding of transcriptional networks controlled by p63 is limited, owing to the low number of bona fide targets. To screen for new targets, we employed chromatin immunoprecipitation from keratinocytes (KCs) coupled to the microarray technology, using both CpG islands and promoter arrays. The former revealed 96 loci, the latter yielded 85 additional genes. We tested 40 of these targets in several functional assays, including: (i) in vivo binding by p63 in primary KCs; (ii) expression analysis in differentiating HaCaT cells and in cells overexpressing DeltaNp63alpha; (iii) promoter transactivation and (iv) immunostaining in normal tissues, confirming their regulation by p63. We discovered several new specific targets whose functional categorization links p63 to cell growth and differentiation.

Indexed as

AnimalsCell DifferentiationChlorocebus aethiopsCOS CellsDNA-Binding ProteinsHumansKeratinocytesOrganogenesisProtein Array AnalysisProtein BindingTrans-ActivatorsTranscriptional ActivationTranscription FactorsTumor Suppressor Protein p53Tumor Suppressor ProteinsDNA-Binding ProteinsTP63 protein, humanTrans-ActivatorsTranscription FactorsTumor Suppressor Protein p53Tumor Suppressor Proteins

Identifiers

PMID17036050
PMCPMC1630419
OpenAlexW2158690038

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.