Evidence map›Paper›PMID 17035634›Full record

ArticleMolecular biology of the cell2006

The unfolded protein response transducer Ire1p contains a nuclear localization sequence recognized by multiple beta importins.

Laurence Goffin, Sadanand Vodala, Christine Fraser, Joanne Ryan, Mark Timms, Sarina Meusburger, Bruno Catimel, Edouard C Nice, Pamela A Silver, Chong-Yun Xiao and 2 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
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  11. Using natural variation in Drosophila to discover previously unknown endoplasmic reticulum stress genes.Proceedings of the National Academy of Sciences of the United States of America · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Laurence GoffinDepartment of Biochemistry and Molecular Biology, University of Melbourne, Victoria 3010, Australia.
Sadanand Vodala
Christine Fraser
Joanne Ryan
Mark Timms
Sarina Meusburger
Bruno Catimel
Edouard C Nice
Pamela A Silver
Chong-Yun Xiao
David A Jans
Mary-Jane H Gething
University of Melbourne · AULudwig Cancer Research · AUMonash University · AUCenter for Systems Biology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Ire1p transmembrane receptor kinase/endonuclease transduces the unfolded protein response (UPR) from the endoplasmic reticulum (ER) to the nucleus in Saccharomyces cerevisiae. In this study, we analyzed the capacity of a highly basic sequence in the linker region of Ire1p to function as a nuclear localization sequence (NLS) both in vivo and in vitro. This 18-residue sequence is capable of targeting green fluorescent protein to the nucleus of yeast cells in a process requiring proteins involved in the Ran GTPase cycle that facilitates nuclear import. Mutagenic analysis and importin binding studies demonstrate that the Ire1p linker region contains overlapping potential NLSs: at least one classical NLS (within sequences 642KKKRKR647 and/or 653KKGR656) that is recognized by yeast importin alpha (Kap60p) and a novel betaNLS (646KRGSRGGKKGRK657) that is recognized by several yeast importin beta homologues. Kinetic binding data suggest that binding to importin beta proteins would predominate in vivo. The UPR, and in particular ER stress-induced HAC1 mRNA splicing, is inhibited by point mutations in the Ire1p NLS that inhibit nuclear localization and also requires functional RanGAP and Ran GEF proteins. The NLS-dependent nuclear localization of Ire1p would thus seem to be central to its role in UPR signaling.

Indexed as

Protein FoldingActive Transport, Cell NucleusAmino Acid SequenceAnimalsBasic-Leucine Zipper Transcription Factorsbeta KaryopherinsCell NucleusConsensus SequenceGene Expression Regulation, FungalIntracellular MembranesKineticsMembrane GlycoproteinsMiceMolecular Sequence DataNuclear Localization SignalsPoint MutationBasic-Leucine Zipper Transcription Factorsbeta KaryopherinsHAC1 protein, S cerevisiaeIRE1 protein, S cerevisiaeMembrane GlycoproteinsNuclear Localization SignalsProtein Serine-Threonine Kinasesran GTP-Binding ProteinRepressor ProteinsRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID17035634
PMCPMC1679693
OpenAlexW2116714438

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.