Evidence map›Paper›PMID 17035316›Full record

ArticleJournal of virology2006

Linker insertion mutations in the herpes simplex virus type 1 UL28 gene: effects on UL28 interaction with UL15 and UL33 and identification of a second-site mutation in the UL15 gene that suppresses a lethal UL28 mutation.

Jennie G Jacobson, Kui Yang, Joel D Baines, Fred L Homa

Abstract readComparative Study
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
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  6. Review
  7. A Domain of Herpes Simplex Virus pUJournal of virology · 2017
    Article
  8. Article
  9. Herpesvirus Capsid Assembly and DNA Packaging.Advances in anatomy, embryology, and cell biology · 2017
    Review
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  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jennie G JacobsonDepartment of Molecular Genetics and Biochemistry, University of Pittsburgh School of Medicine, W1256 Biomedical Science Tower, Pittsburgh, PA 15261, USA. flhoma@pitt.edu
Kui Yang
Joel D Baines
Fred L Homa
Eli Lilly (United States) · USUniversity of Pittsburgh · US

Funding

HERPES SIMPLEX VIRUS TERMINASESR01GM050740 · NIGMS · CORNELL UNIVERSITY ITHACA · PI BAINES, JOEL D. · 1995 to 2007
$2.3M
Herpes Simplex Virus Capsid Assembly and DNA PackagingR01AI060836 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HOMA, FREDERICK L · 2006 to 2010
$1.6M
Herpes Simples Virus Capsid Assembly and DNA PackagingR56AI060836 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HOMA, FREDERICK L · 2011 to 2011
$379k
Herpes Simplex Virus TerminasesR56GM050740 · NIGMS · CORNELL UNIVERSITY · PI BAINES, JOEL D. · 2008 to 2008
$323k
NIAID NIH HHS AI060836NIAID NIH HHS R01 AI060836NIAID NIH HHS R56 AI060836NIGMS NIH HHS GM50740NIGMS NIH HHS R01 GM050740NIGMS NIH HHS R56 GM050740
6 · The paper itself

Abstract

The UL28 protein of herpes simplex virus type 1 (HSV-1) is one of seven viral proteins required for the cleavage and packaging of viral DNA. Previous results indicated that UL28 interacts with UL15 and UL33 to form a protein complex (terminase) that is presumed to cleave concatemeric DNA into genome lengths. In order to define the functional domains of UL28 that are important for DNA cleavage/packaging, we constructed a series of HSV-1 mutants with linker insertion and nonsense mutations in UL28. Insertions that blocked DNA cleavage and packaging were found to be located in two regions of UL28: the first between amino acids 200 to 400 and the second between amino acids 600 to 740. Insertions located in the N terminus or in a region located between amino acids 400 and 600 did not affect virus replication. Insertions in the carboxyl terminus of the UL28 protein were found to interfere with the interaction of UL28 with UL33. In contrast, all of the UL28 insertion mutants were found to interact with UL15 but the interaction was reduced with mutants that failed to react with UL33. Together, these observations were consistent with previous conclusions that UL15 and UL33 interact directly with UL28 but interact only indirectly with each other. Revertant viruses that formed plaques on Vero cells were detected for one of the lethal UL28 insertion mutants. DNA sequence analysis, in combination with genetic complementation assays, demonstrated that a second-site mutation in the UL15 gene restored the ability of the revertant to cleave and package viral DNA. The isolation of an intergenic suppressor mutant provides direct genetic evidence of an association between the UL28 and UL15 proteins and demonstrates that this association is essential for DNA cleavage and packaging.

Indexed as

Amino Acid SequenceAnimalsBlotting, SouthernChlorocebus aethiopsDNA PackagingGenetic Complementation TestHerpesvirus 1, HumanImmunoblottingImmunoprecipitationMolecular Sequence DataMutagenesis, InsertionalMutationSequence Analysis, DNAVero CellsViral ProteinsDNA cleavage and packaging proteins, HerpesvirusUL33 protein, Human herpesvirus 1Viral Proteins

Identifiers

PMID17035316
PMCPMC1676265
OpenAlexW2162268599

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.