Evidence map›Paper›PMID 17031546›Full record

ArticlePhotosynthesis research2006

Evolution of redoxin genes in the green lineage.

Yves Meyer, Christophe Riondet, Laure Constans, Mohamed Ragab Abdelgawwad, Jean Philippe Reichheld, Florence Vignols

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Photosynthesis research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Redox Regulation of Starch Metabolism.Frontiers in plant science · 2018
    Article
  8. Recombinant ACHT1 from Arabidopsis thaliana: crystallization and X-ray crystallographic analysis.Acta crystallographica. Section F, Structural biology communications · 2017
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. The NADPH-dependent thioredoxin system constitutes a functional backup for cytosolic glutathione reductase in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  14. Article
  15. Article
  16. Article
  17. Thioredoxins in chloroplasts.Current genetics · 2007
    Review
  18. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yves MeyerGénome et dévelopement des plantes, UMR 5096, CNRS-UP-IRD Université, Av P. Alduy, Perpignan Cedex, 66860, France. ymeyer@univ-perp.fr
Christophe Riondet
Laure Constans
Mohamed Ragab Abdelgawwad
Jean Philippe Reichheld
Florence Vignols
Laboratoire Génome et Développement des Plantes · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The availability of the Arabidopsis genome revealed the complexity of the gene families implicated in dithiol disulfide exchanges. Most non-green organisms present less dithiol oxidoreductase genes. The availability of the almost complete genome sequence of rice now allows a systematic search for thioredoxins, glutaredoxins and their reducers. This shows that all redoxin families previously defined for Arabidopsis have members in the rice genome and that all the deduced rice redoxins fall within these families. This establishes that the redoxin classification applies both to dicots and monocots. Nevertheless, within each redoxin type the number of members is not the same in these two higher plants and it is not always possible to define orthologues between rice and Arabidopsis. The sequencing of two unicellular algae (Chlamydomonas and Ostreococcus) genomes are almost finished. This allowed us to follow the origin of the different gene families in the green lineage. It appears that most thioredoxin and glutaredoxin types, their chloroplastic, mitochondrial and cytosolic reducers are always present in these unicellular organisms. Nevertheless, striking differences appear in comparison to higher plant redoxins. Some thioredoxin types are not present in these algal genomes including thioredoxins o, clot and glutaredoxins CCxC. Numerous redoxins, including the cytosolic thioredoxins, do not fit with the corresponding higher plant classification. In addition both algae present a NADPH-dependent thioredoxin reductase with a selenocysteine which is highly similar to the animal thioredoxin reductases, a type of thioredoxin reductase not present in higher plants.

Indexed as

Evolution, MolecularGenome, PlantPhylogenyAmino Acid SequenceArabidopsisChlorophytaGene Expression Regulation, PlantGenes, PlantMolecular Sequence DataOryzaOxidoreductasesPlant ProteinsOxidoreductasesPlant Proteins

Identifiers

PMID17031546
OpenAlexW1977445116

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.