Evidence map›Paper›PMID 17028336›Full record

ArticleGenetics2006

Substitution mapping in dahl rats identifies two distinct blood pressure quantitative trait loci within 1.12- and 1.25-mb intervals on chromosome 3.

Soon Jin Lee, Jun Liu, Allison M Westcott, Joshua A Vieth, Sarah J DeRaedt, Siming Yang, Bina Joe, George T Cicila

Abstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
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  11. Closely linked non-additive blood pressure quantitative trait loci.Mammalian genome : official journal of the International Mammalian Genome Society · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Soon Jin LeeDepartment of Physiology, Pharmacology, Metabolism and Cardiovascular Sciences, University of Toledo College of Medicine, Toledo, Ohio 43614, USA.
Jun Liu
Allison M Westcott
Joshua A Vieth
Sarah J DeRaedt
Siming Yang
Bina Joe
George T Cicila

Funding

Identifying Chromosome 3 Blood Pressure QTL CandidatesR01HL068994 · NHLBI · UNIVERSITY OF TOLEDO HEALTH SCI CAMPUS · PI CICILA, GEORGE T · 2003 to 2006
$1.2M
BLOOD PRESSURE CANDIDATE GENE SCREENING--A NEW PARADIGMR01HL062338 · NHLBI · UNIVERSITY OF TOLEDO HEALTH SCI CAMPUS · PI CICILA, GEORGE T · 1999 to 2001
$427k
NHLBI NIH HHS HL62338NHLBI NIH HHS HL68994NHLBI NIH HHS R01 HL068994
6 · The paper itself

Abstract

Substitution mapping was used to refine the localization of blood pressure (BP) quantitative trait loci (QTL) within the congenic region of S.R-Edn3 rats located at the q terminus of rat chromosome 3 (RNO3). An F2(SxS.R-Edn3) population (n=173) was screened to identify rats having crossovers within the congenic region of RNO3 and six congenic substrains were developed that carry shorter segments of R-rat-derived RNO3. Five of the six congenic substrains had significantly lower BP compared to the parental S rat. The lack of BP lowering effect demonstrated by the S.R(ET3x5) substrain and the BP lowering effect retained by the S.R(ET3x2) substrain together define the RNO3 BP QTL-containing region as approximately 4.64 Mb. Two nonoverlapping substrains, S.R(ET3x1) and S.R(ET3x6), had significantly lower BP compared to the S strain, indicating the presence of two distinct BP QTL in the RNO3 q terminus. The RNO3 q terminus was fine mapped with newly developed polymorphic markers to characterize the extent of the congenic regions. The two RNO3 BP QTL regions were thus defined as within intervals of 0.05-1.12 and 0.72-1.25 Mb, respectively. Also important was our difficulty in fine mapping and marker placement in this portion of the rat genome (and thus candidate gene identification) using the available genomic data, including the rat genome sequence.

Indexed as

Chromosome MappingQuantitative Trait LociAnimalsAnimals, CongenicBlood PressureChromosomesCrosses, GeneticFemaleMaleRatsRats, Inbred Dahl

Identifiers

PMID17028336
PMCPMC1698641

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.