Evidence map›Paper›PMID 17028315›Full record

ArticleGenetics2006

roX RNAs are required for increased expression of X-linked genes in Drosophila melanogaster males.

Xinxian Deng, Victoria H Meller

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Emerging Roles of RNA-Binding Proteins in Neurodevelopment.Journal of developmental biology · 2022
    Review
  8. Review
  9. Article
  10. Article
  11. Long Non-Coding RNAs in Insects.Animals : an open access journal from MDPI · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Functional Significance of Satellite DNAs: Insights FromFrontiers in cell and developmental biology · 2020
    Review
  18. Insights into the Functions of LncRNAs inInternational journal of molecular sciences · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Xinxian DengDepartment of Biological Science, Wayne State University, Detroit, MI 48202, USA.
Victoria H Meller
Wayne State University · US

Funding

MOLECULAR GENETICS OF DOSAGE COMPENSATION IN DROSOPHILAR01GM058427 · NIGMS · WAYNE STATE UNIVERSITY · PI MELLER, VICTORIA H · 1999 to 2003
$695k
NIGMS NIH HHS GM5 8427NIGMS NIH HHS R01 GM058427
6 · The paper itself

Abstract

The male-specific lethal (MSL) ribonucleoprotein complex is necessary for equalization of X:A expression levels in Drosophila males, which have a single X chromosome. It binds selectively to the male X chromosome and directs acetylation of histone H4 at lysine 16 (H4Ac16), a modification linked to elevated transcription. roX1 and roX2 noncoding RNAs are essential but redundant components of this complex. Simultaneous removal of both roX RNAs reduces X localization of the MSL proteins and permits their ectopic binding to autosomal sites and the chromocenter. However, the MSL proteins still colocalize, and low levels of H4Ac16 are detected at ectopic sites of MSL binding and residual sites on the X chromosome of roX1- roX2- males. Microarray analysis was performed to reveal the effect of roX1 and roX2 elimination on X-linked and autosomal gene expression. Expression of the X chromosome is decreased by 26% in roX1- roX2- male larvae. Enhanced expression could not be detected at autosomal sites of MSL binding in roX1- roX2- males. These results implicate failure to compensate X-linked genes, rather than inappropriate upregulation of autosomal genes at ectopic sites of MSL binding, as the primary cause of male lethality upon loss of roX RNAs.

Indexed as

AnimalsDNA-Binding ProteinsDosage Compensation, GeneticDrosophila melanogasterDrosophila ProteinsGene Expression RegulationGenes, LethalGenes, X-LinkedHistone AcetyltransferasesMaleNuclear ProteinsOligonucleotide Array Sequence AnalysisRNARNA-Binding ProteinsTranscription FactorsTranscription, GeneticDNA-Binding ProteinsDrosophila ProteinsHistone Acetyltransferasesmof protein, Drosophilamsl-1 protein, Drosophilamsl-2 protein, Drosophilamsl-3 protein, DrosophilaNuclear ProteinsPabp2 protein, DrosophilaRNARNA-Binding ProteinsroX1 protein, DrosophilaTranscription Factors

Identifiers

PMID17028315
PMCPMC1698640
OpenAlexW2148955773

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.