Evidence map›Paper›PMID 17028173›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

A deletion defining a common Asian lineage of Mycobacterium tuberculosis associates with immune subversion.

Sandra M Newton, Rebecca J Smith, Katalin A Wilkinson, Mark P Nicol, Natalie J Garton, Karl J Staples, Graham R Stewart, John R Wain, Adrian R Martineau, Sarah Fandrich and 10 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 111 citations in OpenAlex.

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  7. Effects ofAnnals of translational medicine · 2022
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

20 authors at 4 institutions in 2 countries.

Sandra M NewtonWellcome Trust Center for Research in Clinical Tropical Medicine, Center for Molecular Microbiology and Infection, and Kennedy Institute of Rheumatology, Faculty of Medicine, Imperial College London, London W2 1PG, United Kingdom.
Rebecca J Smith
Katalin A Wilkinson
Mark P Nicol
Natalie J Garton
Karl J Staples
Graham R Stewart
John R Wain
Adrian R Martineau
Sarah Fandrich
Timothy Smallie
Brian Foxwell
Ahmed Al-Obaidi
Jamila Shafi
Kumar Rajakumar
Beate Kampmann
Peter W Andrew
Loems Ziegler-Heitbrock
Michael R Barer
Robert J Wilkinson
University of Leicester · GBImperial College London · GBUniversity of Cape Town · ZAWellcome Trust · GB

Funding

Medical Research Council G0300403Medical Research Council MC_U117588499Wellcome Trust 072070Wellcome Trust 077273
6 · The paper itself

Abstract

Six major lineages of Mycobacterium tuberculosis appear preferentially transmitted amongst distinct ethnic groups. We identified a deletion affecting Rv1519 in CH, a strain isolated from a large outbreak in Leicester U.K., that coincidentally defines the East African-Indian lineage matching a major ethnic group in this city. In broth media, CH grew less rapidly and was less acidic and H2O2-tolerant than reference sequenced strains (CDC1551 and H37Rv). Nevertheless, CH was not impaired in its ability to grow in human monocyte-derived macrophages. When compared with CDC1551 and H37Rv, CH induced less protective IL-12p40 and more antiinflammatory IL-10 and IL-6 gene transcription and secretion from monocyte-derived macrophages. It thus appears that CH compensates microbiological attenuation by skewing the innate response toward phagocyte deactivation. Complementation of Rv1519, but none of nine additional genes absent from CH compared with the type strain, H37Rv, reversed the capacity of CH to elicit antiinflammatory IL-10 production by macrophages. The Rv1519 polymorphism in M. tuberculosis confers an immune subverting phenotype that contributes to the persistence and outbreak potential of this lineage.

Indexed as

EthnicityMutationMycobacterium tuberculosisAsiaBacterial ProteinsCells, CulturedCytokinesDisease Transmission, InfectiousHumansImmune SystemMacrophagesMonocytesPhagocytesPhenotypePolymorphism, GeneticTuberculosisBacterial ProteinsCytokines

Identifiers

PMID17028173
PMCPMC1622867
OpenAlexW1996092792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.