Evidence map›Paper›PMID 17028134›Full record

ArticleBiophysical journal2007

Microtubule protofilament number is modulated in a stepwise fashion by the charge density of an enveloping layer.

Uri Raviv, Toan Nguyen, Rouzbeh Ghafouri, Daniel J Needleman, Youli Li, Herbert P Miller, Leslie Wilson, Robijn F Bruinsma, Cyrus R Safinya

Abstract read
In one paragraph

Article in Biophysical journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Review
  3. Journal of applied crystallography · 2019
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Uri RavivMaterials Department, University of California, Santa Barbara, California 93106, USA. raviv@chem.ch.huji.ac.il
Toan Nguyen
Rouzbeh Ghafouri
Daniel J Needleman
Youli Li
Herbert P Miller
Leslie Wilson
Robijn F Bruinsma
Cyrus R Safinya

Funding

Structures of Lipid-DNA Nonviral Gene Delivery Systems 4R01GM059288 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SAFINYA, CYRUS R · 1999 to 2016
$4.2M
Mechanism &Control of Brain Microtubule DynamicsR01NS013560 · NINDS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI WILSON, LESLIE · 1985 to 2009
$2.9M
NIGMS NIH HHS GM-59288NIGMS NIH HHS R01 GM059288NINDS NIH HHS NS-13560NINDS NIH HHS R01 NS013560
6 · The paper itself

Abstract

Microtubules are able to adjust their protofilament (PF) number and, as a consequence, their dynamics and function, to the assembly conditions and presence of cofactors. However, the principle behind such variations is poorly understood. Using synchrotron x-ray scattering and transmission electron microscopy, we studied how charged membranes, which under certain conditions can envelop pre-assembled MTs, regulate the PF number of those MTs. We show that the mean PF number, <N>, is modulated primarily by the charge density of the membranes. <N> decreases in a stepwise fashion with increasing membrane charge density. <N> does not depend on the membrane-protein stoichiometry or the solution ionic strength. We studied the effect of taxol and found that <N> increases logarithmically with taxol/tubulin stoichiometry. We present a theoretical model, which by balancing the electrostatic and elastic interactions in the system accounts for the trends in our findings and reveals an effective MT bending stiffness of order 10-100 k(B)T/nm, associated with the observed changes in PF number.

Indexed as

AnimalsBiophysicsBrainCattleIonsLipidsMicroscopy, Electron, TransmissionMicrotubulesNanotubesPaclitaxelScattering, RadiationStatic ElectricitySynchrotronsTubulinX-RaysIonsLipidsPaclitaxelTubulin

Identifiers

PMID17028134
PMCPMC1697852

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.