Evidence map›Paper›PMID 17023175›Full record

ArticleJournal of the American Society for Mass Spectrometry2007

Noncovalent complexes of APS reductase from M. tuberculosis: delineating a mechanistic model using ESI-FTICR MS.

Hong Gao, Julie Leary, Kate S Carroll, Carolyn R Bertozzi, Huiyi Chen

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Functional Site Discovery in a Sulfur Metabolism Enzyme by Using Directed Evolution.Chembiochem : a European journal of chemical biology · 2016
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Drug targets in mycobacterial sulfur metabolism.Infectious disorders drug targets · 2007
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Hong GaoSection of Molecular Cell Biology, University of California, Davis, California 95616, USA.
Julie Leary
Kate S Carroll
Carolyn R Bertozzi
Huiyi Chen
University of California, Berkeley · USHoward Hughes Medical Institute · USUniversity of California, Davis · US

Funding

Mycobacterial Sulfation PathwaysR01AI051622 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI BERTOZZI, CAROLYN · 2002 to 2015
$6.0M
Sulfur Metabolism in Human PathogensR01GM087638 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CARROLL, KATE SUZANNE · 2009 to 2025
$5.0M
Chemical MycobateriologyR37AI051622 · NIAID · STANFORD UNIVERSITY · PI BERTOZZI, CAROLYN · 2016 to 2025
$4.7M
Mass Spectrometry and Enzyme ProcessesR01GM063581 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI LEARY, JULIE ANN · 2002 to 2010
$1.8M
NIAID NIH HHS AI 51,622NIAID NIH HHS R01 AI051622NIAID NIH HHS R37 AI051622NIGMS NIH HHS GM 63,581NIGMS NIH HHS R01 GM063581NIGMS NIH HHS R01 GM087638
6 · The paper itself

Abstract

ESI-FTICR MS was utilized to characterize a 4Fe-4S containing protein Mycobacterium tuberculosis APS reductase. This enzyme catalyzes the reduction of APS to sulfite and AMP with reducing equivalents from the protein cofactor, thioredoxin. Under nondenaturing conditions, a distribution of the apoprotein, a 2Fe-2S intermediate, and the 4Fe-4S holoprotein were observed. Accurate mass measurements indicated an oxidation state of +2 for the 4Fe-4S cluster, with no disulfide bond in the holoenzyme. Gas-phase stability of the 4Fe-4S cluster was investigated using both in-source and collision induced dissociation, which provided information regarding the relative gas-phase binding strength of iron towards protein ligands and inorganic sulfides. Noncovalent complexes of the holoprotein with several ligands, including APS, thioredoxin, and AMP, were also investigated. Calculated values of dissociation constants for the complexes indicate that AMP binds with a higher affinity to the enzyme intermediate than to the free enzyme. The implications of the binary and ternary complexes observed by gas-phase noncovalent interactions in the mechanism of APS reduction are discussed.

Indexed as

Adenosine MonophosphateIron-Sulfur ProteinsMycobacterium tuberculosisOxidoreductases Acting on Sulfur Group DonorsProtein BindingSpectrometry, Mass, Electrospray IonizationSpectroscopy, Fourier Transform InfraredThioredoxinsAdenosine Monophosphateadenylylsulfate reductaseIron-Sulfur ProteinsOxidoreductases Acting on Sulfur Group DonorsThioredoxins

Identifiers

PMID17023175
PMCPMC2755055
OpenAlexW2086863726

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.