Evidence map›Paper›PMID 17021849›Full record

ArticlePlant cell reports2007

Regulation of the beta-hydroxyacyl ACP dehydratase gene of Picea mariana by alternative splicing.

Helen H Tai, Martin Williams, Abhinav Iyengar, Jessica Yeates, Tannis Beardmore

Abstract read
PubMed Publisher
In one paragraph

Article in Plant cell reports, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Systemic cold stress adaptation of Chlamydomonas reinhardtii.Molecular & cellular proteomics : MCP · 2013
    Article
  5. Article
  6. Article
  7. A role for SR proteins in plant stress responses.Plant signaling & behavior · 2011
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Helen H TaiCanadian Forest Service, Natural Resources Canada, P.O. Box 4000, Fredericton, NB, E3B 5P7, Canada. htai@nrcan.gc.ca
Martin Williams
Abhinav Iyengar
Jessica Yeates
Tannis Beardmore
Natural Resources Canada · CACanadian Forest Service · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gene for beta-hydroxyacyl ACP dehydratase, a de novo fatty acid biosynthetic enzyme, was cloned from Picea mariana (black spruce) and consists of five exons and four introns. The first intron of the beta-hydroxyacyl ACP dehydratase mRNA is alternatively spliced. Retention of intron 1 in splice variants results in truncation of the beta-hydroxyacyl ACP dehydratase ORF at a premature termination codon. In addition, splicing of intron 1 was found to be associated with cold temperature. mRNAs retaining intron 1 increase with seed imbibition at 22 degrees C but not 4 degrees C, whereas, splicing of intron 1 increases in winter weeks with temperatures below freezing. These results provide evidence that alternative splicing may also contribute to regulation of lipid biosynthesis in Picea mariana.

Indexed as

Alternative SplicingAmino Acid SequenceBase SequenceBlotting, NorthernEnoyl-CoA HydrataseExonsGene Expression Regulation, PlantIntronsMolecular Sequence DataPiceaPlant ProteinsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerRNA Splice SitesSeasonsSeedsEnoyl-CoA HydratasePlant ProteinsRNA, MessengerRNA Splice Sites

Identifiers

PMID17021849
OpenAlexW1995001365

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.