Evidence map›Paper›PMID 17018572›Full record

ArticleRNA (New York, N.Y.)2006

RNA editing in Drosophila melanogaster: New targets and functional consequences.

Mark Stapleton, Joseph W Carlson, Susan E Celniker

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in RNA (New York, N.Y.), 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Frontiers in genetics · 2019
    Review
  10. Article
  11. Article
  12. In search of beneficial coding RNA editing.Molecular biology and evolution · 2015
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Reduction of RNA A-to-I editing in Drosophila acclimated to heat shock.The Kaohsiung journal of medical sciences · 2013
    Article
  18. Adar is essential for optimal presynaptic function.Molecular and cellular neurosciences · 2013
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mark StapletonBerkeley Drosophila Genome Project, Department of Genome Biology, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA. staple@fruitfly.org
Joseph W Carlson
Susan E Celniker
Lawrence Berkeley National Laboratory · US

Funding

Completion of the Drosophila Gene CollectionR01HG002673 · NHGRI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI CELNIKER, SUSAN E · 2003 to 2008
$6.2M
NHGRI NIH HHS HG002673NHGRI NIH HHS R01 HG002673
6 · The paper itself

Abstract

Adenosine deaminases that act on RNA [adenosine deaminase, RNA specific (ADAR)] catalyze the site-specific conversion of adenosine to inosine in primary mRNA transcripts. These re-coding events affect coding potential, splice sites, and stability of mature mRNAs. ADAR is an essential gene, and studies in mouse, Caenorhabditis elegans, and Drosophila suggest that its primary function is to modify adult behavior by altering signaling components in the nervous system. By comparing the sequence of isogenic cDNAs to genomic DNA, we have identified and experimentally verified 27 new targets of Drosophila ADAR. Our analyses led us to identify new classes of genes whose transcripts are targets of ADAR, including components of the actin cytoskeleton and genes involved in ion homeostasis and signal transduction. Our results indicate that editing in Drosophila increases the diversity of the proteome, and does so in a manner that has direct functional consequences on protein function.

Indexed as

Adenosine DeaminaseAnimalsBase SequenceCytoskeletal ProteinsDNA, ComplementaryDNA PrimersDrosophila melanogasterDrosophila ProteinsEye ProteinsGenes, InsectIon ChannelsMembrane GlycoproteinsMolecular Sequence DataReceptors, PeptideReverse Transcriptase Polymerase Chain ReactionRNA-Binding ProteinsADARB1 protein, humanAdenosine Deaminaseboss protein, DrosophilaCytoskeletal ProteinsDNA, ComplementaryDNA PrimersDrosophila ProteinsEye ProteinsIon ChannelsMembrane GlycoproteinsReceptors, PeptideRNA-Binding Proteins

Identifiers

PMID17018572
PMCPMC1624909
OpenAlexW2164469143

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.