Evidence map›Paper›PMID 17015665›Full record

ArticleJournal of bacteriology2006

Blocking chromosome translocation during sporulation of Bacillus subtilis can result in prespore-specific activation of sigmaG that is independent of sigmaE and of engulfment.

Vasant K Chary, Panagiotis Xenopoulos, Patrick J Piggot

Abstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Vasant K CharyDepartment of Microbiology and Immunology, 3400 North Broad Street, Philadelphia, PA 19140, USA.
Panagiotis Xenopoulos
Patrick J Piggot

Funding

GENE EXPRESSION DURING SPORULATIONR01GM043577 · NIGMS · TEMPLE UNIV OF THE COMMONWEALTH · PI PIGGOT, PATRICK J. · 1990 to 2012
$3.9M
NIGMS NIH HHS GM43577NIGMS NIH HHS R01 GM043577
6 · The paper itself

Abstract

Formation of spores by Bacillus subtilis is characterized by cell compartment-specific gene expression directed by four RNA polymerase sigma factors, which are activated in the order sigma(F)-sigma(E)-sigma(G)-sigma(K). Of these, sigma(G) becomes active in the prespore upon completion of engulfment of the prespore by the mother cell. Transcription of the gene encoding sigma(G), spoIIIG, is directed in the prespore by RNA polymerase containing sigma(F) but also requires the activity of sigma(E) in the mother cell. When first formed, sigma(G) is not active. Its activation requires expression of additional sigma(E)-directed genes, including the genes required for completion of engulfment. Here we report conditions in which sigma(G) becomes active in the prespore in the absence of sigma(E) activity and of completion of engulfment. The conditions are (i) having an spoIIIE mutation, so that only the origin-proximal 30% of the chromosome is translocated into the prespore, and (ii) placing spoIIIG in an origin-proximal location on the chromosome. The main function of the sigma(E)-directed regulation appears to be to coordinate sigma(G) activation with the completion of engulfment, not to control the level of sigma(G) activity. It seems plausible that the role of sigma(E) in sigma(G) activation is to reverse some inhibitory signal (or signals) in the engulfed prespore, a signal that is not present in the spoIIIE mutant background. It is not clear what the direct activator of sigma(G) in the prespore is. Competition for core RNA polymerase between sigma(F) and sigma(G) is unlikely to be of major importance.

Indexed as

Gene Expression Regulation, BacterialBacillus subtilisBacterial Proteinsbeta-GalactosidaseChromosomes, BacterialDNA-Directed RNA PolymerasesGenes, ReporterLuminescent ProteinsMicroscopy, FluorescenceSigma FactorSpores, BacterialTranscription FactorsBacterial Proteinsbeta-GalactosidaseDNA-Directed RNA PolymerasesFliA protein, BacteriaLuminescent ProteinsRNA polymerase sigma GSigma Factorsporulation-specific sigma factorsTranscription Factorsyellow fluorescent protein, Bacteria

Identifiers

PMID17015665
PMCPMC1636243

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.