Evidence map›Paper›PMID 17015662›Full record

ArticleJournal of bacteriology2006

The Rgg regulator of Streptococcus pyogenes influences utilization of nonglucose carbohydrates, prophage induction, and expression of the NAD-glycohydrolase virulence operon.

Alexander V Dmitriev, Emily J McDowell, Kyle V Kappeler, Michelle A Chaussee, Lindsey D Rieck, Michael S Chaussee

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
  2. Article
  3. Streptococcal peptides and their roles in host-microbe interactions.Frontiers in cellular and infection microbiology · 2023
    Review
  4. Article
  5. Pathogens (Basel, Switzerland) · 2021
    Review
  6. TheJournal of bacteriology · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Quorum sensing in group A Streptococcus.Frontiers in cellular and infection microbiology · 2014
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Alexander V DmitrievDivision of Basic Biomedical Sciences, Sanford School of Medicine of the University of South Dakota, Lee Medical Building, 414 East Clark Street, Vermillion, SD 57069-2390, USA.
Emily J McDowell
Kyle V Kappeler
Michelle A Chaussee
Lindsey D Rieck
Michael S Chaussee
University of South Dakota · US

Funding

WESTCORE DNA SEQUENCING AND GENOTYPING CORE FACILITYP20RR016479 · NCRR · UNIVERSITY OF SOUTH DAKOTA · PI EICHLER, BARRETT · 2001 to 2011
$32.2M
Regulation of Streptococcus pyogenes exoproteinsR01AI052147 · NIAID · UNIVERSITY OF SOUTH DAKOTA · PI CHAUSSEE, MICHAEL S · 2004 to 2007
$889k
NCRR NIH HHS 2 P20 RR016479NCRR NIH HHS P20 RR016479NIAID NIH HHS R01 AI052147
6 · The paper itself

Abstract

The expression of many virulence-associated genes in Streptococcus pyogenes is controlled in a growth phase-dependent manner. Unlike the model organisms Escherichia coli and Bacillus subtilis, such regulation is apparently not dependent upon alternative sigma factors but appears to rely on complex interactions among several transcriptional regulators, including Rgg. The purpose of this study was to identify changes in gene expression associated with inactivation of the rgg gene in S. pyogenes strain NZ131 (serotype M49). To this end, the transcriptomes of wild-type and rgg mutant strains were analyzed during both the exponential and postexponential phases of growth using Affymetrix NimbleExpress gene chips. Genomewide differences in transcript levels were identified in both phases of growth. Inactivation of rgg disrupted coordinate expression of genes associated with the metabolism of nonglucose carbon sources, such as fructose, mannose, and sucrose. The changes were associated with an inability of the mutant strain to grow using these compounds as the primary carbon source. Bacteriophage transcript levels were also altered in the mutant strain and were associated with decreased induction of at least one prophage. Finally, transcripts encoding virulence factors involved in cytolysin-mediated translocation of NAD-glycohydrolase, including the immunity factor IFS and the cytolysin (streptolysin O [SLO]), were more abundant in the mutant strain, which correlated with the amount of NADase and SLO activities in culture supernatant fluids. The results provide further evidence that Rgg contributes to growth phase-dependent gene regulation in strain NZ131.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsCarbohydrate MetabolismDeoxyribonucleasesDNA-Binding ProteinsGene DeletionGene Expression ProfilingMembrane GlycoproteinsNAD+ NucleosidaseOligonucleotide Array Sequence AnalysisOperonPerforinPore Forming Cytotoxic ProteinsProtein TransportRNA, BacterialRNA, MessengerBacterial ProteinsDeoxyribonucleasesDNA-Binding ProteinsMembrane GlycoproteinsNAD+ NucleosidasePerforinPore Forming Cytotoxic Proteinsrgg protein, StreptococcusRNA, BacterialRNA, MessengerTrans-ActivatorsVirulence Factors

Identifiers

PMID17015662
PMCPMC1636216
OpenAlexW2124835795

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.