Evidence map›Paper›PMID 17014716›Full record

ArticleRetrovirology2006

Effects of prostratin on Cyclin T1/P-TEFb function and the gene expression profile in primary resting CD4+ T cells.

Tzu-Ling Sung, Andrew P Rice

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 78 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tzu-Ling SungDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas 77030, USA. ts144315@bcm.tmc.edu
Andrew P Rice
Baylor College of Medicine · US

Funding

Mechanisms of HIV-1 latency in CD4+ T lymphocytesR01AI035381 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 1995 to 2007
$2.5M
Mechanism of HIV-1 Tat FunctionR56AI035381 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 2009 to 2009
$384k
NIAID NIH HHS AI35381NIAID NIH HHS R01 AI035381NIAID NIH HHS R56 AI035381
6 · The paper itself

Abstract

backgroundThe latent reservoir of human immunodeficiency virus type 1 (HIV-1) in resting CD4+ T cells is a major obstacle to the clearance of infection by highly active antiretroviral therapy (HAART). Recent studies have focused on searches for adjuvant therapies to activate this reservoir under conditions of HAART. Prostratin, a non tumor-promoting phorbol ester, is a candidate for such a strategy. Prostratin has been shown to reactivate latent HIV-1 and Tat-mediated transactivation may play an important role in this process. We examined resting CD4+ T cells from healthy donors to determine if prostratin induces Cyclin T1/P-TEFb, a cellular kinase composed of Cyclin T1 and Cyclin-dependent kinase-9 (CDK9) that mediates Tat function. We also examined effects of prostratin on Cyclin T2a, an alternative regulatory subunit for CDK9, and 7SK snRNA and the HEXIM1 protein, two factors that associate with P-TEFb and repress its kinase activity.

resultsProstratin up-regulated Cyclin T1 protein expression, modestly induced CDK9 protein expression, and did not affect Cyclin T2a protein expression. Although the kinase activity of CDK9 in vitro was up-regulated by prostratin, we observed a large increase in the association of 7SK snRNA and the HEXIM1 protein with CDK9. Using HIV-1 reporter viruses with and without a functional Tat protein, we found that prostratin stimulation of HIV-1 gene expression appears to require a functional Tat protein. Microarray analyses were performed and several genes related to HIV biology, including APOBEC3B, DEFA1, and S100 calcium-binding protein genes, were found to be regulated by prostratin.

conclusionProstratin induces Cyclin T1 expression and P-TEFb function and this is likely to be involved in prostratin reactivation of latent HIV-1 proviruses. The large increase in association of 7SK and HEXIM1 with P-TEFb following prostratin treatment may reflect a requirement in CD4+ T cells for a precise balance between active and catalytically inactive P-TEFb. Additionally, genes regulated by prostratin were identified that have the potential to regulate HIV-1 replication both positively and negatively.

Indexed as

Gene Expression ProfilingGene Expression Regulation, ViralAntiretroviral Therapy, Highly ActiveCD4-Positive T-LymphocytesCyclin-Dependent Kinase 9CyclinsCyclin TGene Expression RegulationGenes, ReporterHumansModels, GeneticPhorbol EstersPositive Transcriptional Elongation Factor BRNA-Binding ProteinsTranscription FactorsCCNT1 protein, humanCyclin-Dependent Kinase 9CyclinsCyclin THEXIM1 protein, humanPhorbol EstersPositive Transcriptional Elongation Factor BprostratinRNA-Binding ProteinsTranscription Factors

Identifiers

PMID17014716
PMCPMC1599745
OpenAlexW2168127928

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.