Evidence map›Paper›PMID 17010211›Full record

ArticleJournal of biology2006

High-resolution quantitative imaging of mammalian and bacterial cells using stable isotope mass spectrometry.

Claude Lechene, Francois Hillion, Greg McMahon, Douglas Benson, Alan M Kleinfeld, J Patrick Kampf, Daniel Distel, Yvette Luyten, Joseph Bonventre, Dirk Hentschel and 5 more

Open access · goldAbstract read
In one paragraph

Article in Journal of biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 145 papers.

0numbers the graph read from it
0cells of the map it votes in
145citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

145 citing papers in PubMed, 346 citations in OpenAlex.

  1. Advances in spatial omics for the analysis of prostate cancer.Analytical and bioanalytical chemistry · 2026
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  9. Inorganic sulfate is critical forProceedings of the National Academy of Sciences of the United States of America · 2025
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  11. Review
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  14. Hunting the Cell CycleLife (Basel, Switzerland) · 2024
    Article
  15. Article
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  17. Review
  18. Article
  19. Vitamin BNature metabolism · 2023
    Article
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85 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 3 countries.

Claude LecheneNational Resource for Imaging Mass Spectrometry, Harvard Medical School and Department of Medicine, Brigham and Women's Hospital, Cambridge, MA 02139, USA. cpl@harvard.edu
Francois Hillion
Greg McMahon
Douglas Benson
Alan M Kleinfeld
J Patrick Kampf
Daniel Distel
Yvette Luyten
Joseph Bonventre
Dirk Hentschel
Kwon Moo Park
Susumu Ito
Martin Schwartz
Gilles Benichou
Georges Slodzian
Harvard University · USOcean Foundation · USTorrey Pines Institute For Molecular Studies · USBoston University · USCameca (France) · FRCampus France · FRGreen Lane Hospital · GBMassachusetts General Hospital · USUniversity of Virginia · US

Funding

MECHANISMS OF SENSITIZATION IN HIGH-RISK CORNEAL GRAFTSR01EY012963 · NEI · SCHEPENS EYE RESEARCH INSTITUTE · PI DANA, REZA · 2000 to 2025
$15.1M
National Resources for Imaging Mass SpectrometryP41EB001974 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI LECHENE, CLAUDE P · 2004 to 2014
$11.8M
The Rho Family GTPases in Integrin SignalingR01GM047214 · NIGMS · YALE UNIVERSITY · PI SCHWARTZ, MARTIN A · 1991 to 2020
$6.3M
Mechanisms of Ischemic Kidney Injury and RepairR37DK039773 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI BONVENTRE, JOSEPH VINCENT · 1993 to 2021
$5.2M
Training Program in Hearing and BalanceT32DC000033 · NIDCD · UNIVERSITY OF WASHINGTON · PI WERNER, LYNNE A. · 1991 to 2015
$3.9M
MECHANISMS OF PLASMA MEMBRANE TRANSPORT OF FATTY ACIDSR01DK058762 · NIDDK · TORREY PINES INST FOR MOLECULAR STUDIES · PI KLEINFELD, ALAN MARC · 2001 to 2008
$2.8M
NATIONAL RESOURCE FOR IMAGING MASS SPECTROMETRYP41RR014579 · NCRR · BRIGHAM AND WOMEN'S HOSPITAL · PI LECHENE, CLAUDE P · 2000 to 2002
$2.7M
SPATIAL DYNAMICS OF PROTEIN TURNOVER IN COCHLEAR01DC004179 · NIDCD · BRIGHAM AND WOMEN'S HOSPITAL · PI LECHENE, CLAUDE P · 2000 to 2002
$1.3M
BIOMECHANICS OF COCHLEAR FINE TUNINGZ01DC000033 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI CHADWICK, RICHARD S. · 1996 to 2008
$1.2M
SPATIAL DYNAMICS OF PROTEIN TURNOVER IN STEREOCILIAR21DC003463 · NIDCD · BRIGHAM AND WOMEN'S HOSPITAL · PI LECHENE, CLAUDE P · 1997 to 1997
–
Intramural NIH HHS Z01 DC000033NCRR NIH HHS P41RR14579NEI NIH HHS R01 EY012963NEI NIH HHS R01EY12963NIBIB NIH HHS P41 EB001974NIBIB NIH HHS P41EB001974NIDCD NIH HHS DC00033NIDCD NIH HHS DC03463NIDCD NIH HHS R01 DC004179NIDCD NIH HHS R01DC04179NIDCD NIH HHS T32 DC000033NIDDK NIH HHS R01 DK058762NIDDK NIH HHS R01DK58762NIDDK NIH HHS R37 DK039773NIDDK NIH HHS R37DK39773NIGMS NIH HHS R01 GM047214NIGMS NIH HHS R01GM47214
6 · The paper itself

Abstract

backgroundSecondary-ion mass spectrometry (SIMS) is an important tool for investigating isotopic composition in the chemical and materials sciences, but its use in biology has been limited by technical considerations. Multi-isotope imaging mass spectrometry (MIMS), which combines a new generation of SIMS instrument with sophisticated ion optics, labeling with stable isotopes, and quantitative image-analysis software, was developed to study biological materials.

resultsThe new instrument allows the production of mass images of high lateral resolution (down to 33 nm), as well as the counting or imaging of several isotopes simultaneously. As MIMS can distinguish between ions of very similar mass, such as 12C15N- and 13C14N-, it enables the precise and reproducible measurement of isotope ratios, and thus of the levels of enrichment in specific isotopic labels, within volumes of less than a cubic micrometer. The sensitivity of MIMS is at least 1,000 times that of 14C autoradiography. The depth resolution can be smaller than 1 nm because only a few atomic layers are needed to create an atomic mass image. We illustrate the use of MIMS to image unlabeled mammalian cultured cells and tissue sections; to analyze fatty-acid transport in adipocyte lipid droplets using 13C-oleic acid; to examine nitrogen fixation in bacteria using 15N gaseous nitrogen; to measure levels of protein renewal in the cochlea and in post-ischemic kidney cells using 15N-leucine; to study DNA and RNA co-distribution and uridine incorporation in the nucleolus using 15N-uridine and 81Br of bromodeoxyuridine or 14C-thymidine; to reveal domains in cultured endothelial cells using the native isotopes 12C, 16O, 14N and 31P; and to track a few 15N-labeled donor spleen cells in the lymph nodes of the host mouse.

conclusionMIMS makes it possible for the first time to both image and quantify molecules labeled with stable or radioactive isotopes within subcellular compartments.

Indexed as

AdipocytesAnimalsBromodeoxyuridineCells, CulturedDNAEndothelial CellsGammaproteobacteriaIsotopesMass SpectrometryMiceProteinsRatsRNABromodeoxyuridineDNAIsotopesProteinsRNA

Identifiers

PMID17010211
PMCPMC1781526
OpenAlexW1935017661

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.