Evidence map›Paper›PMID 17006605›Full record

ArticleJournal of human genetics2006

Molecular analysis of two uncharacterized sequence variants of the VHL gene.

Maddalena Martella, Leonardo Salviati, Alberto Casarin, Eva Trevisson, Giuseppe Opocher, Roberta Polli, David Gross, Alessandra Murgia

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In one paragraph

Article in Journal of human genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. The pVHLOncotarget · 2017
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Maddalena MartellaDepartment of Pediatrics, University of Padova, Via Giustiniani 3, 35128, Padua, Italy.
Leonardo SalviatiServizio di Genetica Clinica ed Epidemiologica, Department of Pediatrics, University of Padova, Padua, Italy.
Alberto CasarinDepartment of Pediatrics, University of Padova, Via Giustiniani 3, 35128, Padua, Italy.
Eva TrevissonDepartment of Pediatrics, University of Padova, Via Giustiniani 3, 35128, Padua, Italy.
Giuseppe OpocherDepartment of Medical and Surgical Sciences, University of Padua, Padua, Italy.
Roberta PolliDepartment of Pediatrics, University of Padova, Via Giustiniani 3, 35128, Padua, Italy.
David GrossDepartment of Medicine, Hadassah University Hospital, Jerusalem, Israel.
Alessandra MurgiaDepartment of Pediatrics, University of Padova, Via Giustiniani 3, 35128, Padua, Italy. alessandra.murgia@unipd.it.
University of Padua · ITHadassah Academic College · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in the VHL gene cause von Hippel-Lindau disease, a cancer predisposing syndrome characterized by a variety of benign and malignant neoplasms. We report the molecular characterization of two sequence variants of the VHL gene: a synonymous substitution c.462 A>C in exon 2 and a duplication of 11 bp in the promoter region (c.-65_-55dup11). The first variant is a pathogenic mutation because, although it does not change the sense of the affected codon, it causes skipping of exon 2 in the affected allele by altering the splicing consensus site at the 3' end of exon 2. The 11 bp duplication represents a nonpathogenic variant. In fact, although it affects a critical region of the VHL promoter, it was found in healthy controls, and we show that carrier individuals express both VHL alleles at equimolar levels. Our data underline the importance of careful evaluation of the potential pathogenicity of sequence variants that may not belong to the obvious disease-causing mutation categories, or that affect relevant regulatory regions. mRNA analysis will be required to ultimately resolve this issue.

Indexed as

Genetic VariationMutationAdolescentAdultAllelesBase SequenceChildExonsFemaleHumansMaleMolecular Sequence DataPolymorphism, GeneticPromoter Regions, GeneticVon Hippel-Lindau Tumor Suppressor ProteinVHL protein, humanVon Hippel-Lindau Tumor Suppressor Protein

Identifiers

PMID17006605
OpenAlexW1989549717

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.