Evidence map›Paper›PMID 17000769›Full record

ArticleMolecular and cellular biology2006

Recruitment of the nucleotide excision repair endonuclease XPG to sites of UV-induced dna damage depends on functional TFIIH.

Angelika Zotter, Martijn S Luijsterburg, Daniël O Warmerdam, Shehu Ibrahim, Alex Nigg, Wiggert A van Cappellen, Jan H J Hoeijmakers, Roel van Driel, Wim Vermeulen, Adriaan B Houtsmuller

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 96 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Article
  7. XPG: a multitasking genome caretaker.Cellular and molecular life sciences : CMLS · 2022
    Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Angelika ZotterDepartment of Cell Biology and Genetics, Erasmus Medical Center, 3000 CA Rotterdam, The Netherlands.
Martijn S Luijsterburg
Daniël O Warmerdam
Shehu Ibrahim
Alex Nigg
Wiggert A van Cappellen
Jan H J Hoeijmakers
Roel van Driel
Wim Vermeulen
Adriaan B Houtsmuller
Erasmus MC · NLAmsterdam University of Applied Sciences · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The structure-specific endonuclease XPG is an indispensable core protein of the nucleotide excision repair (NER) machinery. XPG cleaves the DNA strand at the 3' side of the DNA damage. XPG binding stabilizes the NER preincision complex and is essential for the 5' incision by the ERCC1/XPF endonuclease. We have studied the dynamic role of XPG in its different cellular functions in living cells. We have created mammalian cell lines that lack functional endogenous XPG and stably express enhanced green fluorescent protein (eGFP)-tagged XPG. Life cell imaging shows that in undamaged cells XPG-eGFP is uniformly distributed throughout the cell nucleus, diffuses freely, and is not stably associated with other nuclear proteins. XPG is recruited to UV-damaged DNA with a half-life of 200 s and is bound for 4 min in NER complexes. Recruitment requires functional TFIIH, although some TFIIH mutants allow slow XPG recruitment. Remarkably, binding of XPG to damaged DNA does not require the DDB2 protein, which is thought to enhance damage recognition by NER factor XPC. Together, our data present a comprehensive view of the in vivo behavior of a protein that is involved in a complex chromatin-associated process.

Indexed as

DNA DamageDNA RepairAnimalsCell Line, TransformedCell SurvivalCell Transformation, ViralCHO CellsCricetinaeDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesFluorescence Recovery After PhotobleachingFluorescent DyesGreen Fluorescent ProteinsHeLa CellsHumansDAPIDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesFluorescent DyesGreen Fluorescent ProteinsIndolesNuclear ProteinsRecombinant Fusion ProteinsTranscription FactorsTranscription Factor TFIIH

Identifiers

PMID17000769
PMCPMC1636808
OpenAlexW2167459214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.