ArticleExtremophiles : life under extreme conditions2007
Diversity of 16S rRNA gene, ITS region and aclB gene of the Aquificales.
Article in Extremophiles : life under extreme conditions, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 44 citations in OpenAlex.
- Microbial diversity of hot springs of the Kuril Islands.BMC microbiology · 2024Article
- A Simple and Effective Method for Solid Medium Cultivation of Strictly Hydrogen- and Sulfur-oxidizing Chemolithoautotrophs Predominant in Deep-sea Hydrothermal Fields.Microbes and environments · 2023Article
- Meta-Analysis of Microbial Communities in Hot Springs: Recurrent Taxa and Complex Shaping Factors beyond pH and Temperature.Microorganisms · 2020Article
- Tailoring Hydrothermal Vent Biodiversity Toward Improved Biodiscovery Using a NovelFrontiers in microbiology · 2020Article
- Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats.Astrobiology · 2019Article
- Nitrogenase Activity in Thermophilic Chemolithoautotrophic Bacteria in the Phylum Aquificae Isolated under Nitrogen-Fixing Conditions from Nakabusa Hot Springs.Microbes and environments · 2018Article
- Diversity of Total Bacterial Communities and Chemoautotrophic Populations in Sulfur-Rich Sediments of Shallow-Water Hydrothermal Vents off Kueishan Island, Taiwan.Microbial ecology · 2017Article
- Novel, Deep-Branching Heterotrophic Bacterial Populations Recovered from Thermal Spring Metagenomes.Frontiers in microbiology · 2016Article
- Metabolic characteristics of dominant microbes and key rare species from an acidic hot spring in Taiwan revealed by metagenomics.BMC genomics · 2015Article
- Taxis toward hydrogen gas by Methanococcus maripaludis.Scientific reports · 2013Article
- Comparative genomic analysis of phylogenetically closely related Hydrogenobaculum sp. isolates from Yellowstone National Park.Applied and environmental microbiology · 2013Article
- Metagenome sequence analysis of filamentous microbial communities obtained from geochemically distinct geothermal channels reveals specialization of three aquificales lineages.Frontiers in microbiology · 2013Article
- Biogeography of Persephonella in deep-sea hydrothermal vents of the Western Pacific.Frontiers in microbiology · 2013Article
- Diversification of bacterial community composition along a temperature gradient at a thermal spring.Microbes and environments · 2012Article
- The biological deep sea hydrothermal vent as a model to study carbon dioxide capturing enzymes.Marine drugs · 2011Review
- 16S rRNA phylogenetic analysis and quantification of Korarchaeota indigenous to the hot springs of Kamchatka, Russia.Extremophiles : life under extreme conditions · 2011Article
- CO(2) uptake and fixation by a thermoacidophilic microbial community attached to precipitated sulfur in a geothermal spring.Applied and environmental microbiology · 2009Article
- Culture dependent and independent analyses of 16S rRNA and ATP citrate lyase genes: a comparison of microbial communities from different black smoker chimneys on the Mid-Atlantic Ridge.Extremophiles : life under extreme conditions · 2008Article
- Relative importance of H2 and H2S as energy sources for primary production in geothermal springs.Applied and environmental microbiology · 2008Article
- Molecular characterization of the diversity and distribution of a thermal spring microbial community by using rRNA and metabolic genes.Applied and environmental microbiology · 2008Article
Corrections and comments
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Aquificales are prevalent members of the microbial communities inhabiting many marine and terrestrial hydrothermal systems. Numerous new strains were obtained from deep-sea and terrestrial hydrothermal systems. In order to resolve the phylogenetic relationships within this group, three different phylogenetic datasets were used, namely the 16S rRNA gene, the intergenic transcribed spacer region between the 16S rRNA and 23S rRNA genes (ITS) and the gene coding for the ATP citrate lyase (aclB), a key enzyme in the reductive TCA cycle. The data were analyzed using neighbor-joining, parsimony and maximum likelihood. The resulting phylogenies appeared to be consistent between the three markers. The three genes confirmed the presence of isolates that merit further characterization and descriptions as new species and perhaps even new genera. The detailed phylogenetic interrelationships of these isolates are described here.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.