Evidence map›Paper›PMID 16980477›Full record

ArticleJournal of bacteriology2006

The Escherichia coli GTPase CgtAE is involved in late steps of large ribosome assembly.

Mengxi Jiang, Kaustuv Datta, Angela Walker, John Strahler, Pia Bagamasbad, Philip C Andrews, Janine R Maddock

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 148 citations in OpenAlex.

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  10. Review
  11. YbiB: a novel interactor of the GTPase ObgE.Nucleic acids research · 2023
    Article
  12. Article
  13. Molecular and cellular biology · 2021
    Article
  14. Article
  15. Human Mitoribosome Biogenesis and Its Emerging Links to Disease.International journal of molecular sciences · 2021
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Mengxi JiangDepartment of Molecular, Cellular and Developmental Biology, University of Michigan, 830 North University, Ann Arbor, MI 48109-1048, USA.
Kaustuv Datta
Angela Walker
John Strahler
Pia Bagamasbad
Philip C Andrews
Janine R Maddock
Institut thématique Génétique, génomique et bioinformatique · FRUniversity of Michigan–Ann Arbor · US

Funding

UNDERSTANDING THE PATHOGENESIS OF CAMPYLOBACTER JEJUNIP41RR018627 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FINLEY, RUSSELL L · 2003 to 2007
$12.4M
NCRR NIH HHS 1P41 RR018627NCRR NIH HHS P41 RR018627
6 · The paper itself

Abstract

The bacterial ribosome is an extremely complicated macromolecular complex the in vivo biogenesis of which is poorly understood. Although several bona fide assembly factors have been identified, their precise functions and temporal relationships are not clearly defined. Here we describe the involvement of an Escherichia coli GTPase, CgtA(E), in late steps of large ribosomal subunit biogenesis. CgtA(E) belongs to the Obg/CgtA GTPase subfamily, whose highly conserved members are predominantly involved in ribosome function. Mutations in CgtA(E) cause both polysome and rRNA processing defects; small- and large-subunit precursor rRNAs accumulate in a cgtA(E) mutant. In this study we apply a new semiquantitative proteomic approach to show that CgtA(E) is required for optimal incorporation of certain late-assembly ribosomal proteins into the large ribosomal subunit. Moreover, we demonstrate the interaction with the 50S ribosomal subunits of specific nonribosomal proteins (including heretofore uncharacterized proteins) and define possible temporal relationships between these proteins and CgtA(E). We also show that purified CgtA(E) associates with purified ribosomal particles in the GTP-bound form. Finally, CgtA(E) cofractionates with the mature 50S but not with intermediate particles accumulated in other large ribosome assembly mutants.

Indexed as

Amino Acid SubstitutionCell FractionationDEAD-box RNA HelicasesEscherichia coliEscherichia coli ProteinsGene DeletionGTP PhosphohydrolasesMonomeric GTP-Binding ProteinsMutation, MissenseProtein BindingRibosomal ProteinsRibosomesRNA HelicasesDEAD-box RNA HelicasesdeaD protein, E coliEscherichia coli ProteinsGTP PhosphohydrolasesMonomeric GTP-Binding ProteinsObgE protein, E coliRibosomal ProteinsRNA Helicases

Identifiers

PMID16980477
PMCPMC1595513
OpenAlexW2148417715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.