Evidence map›Paper›PMID 16980469›Full record

ArticleJournal of bacteriology2006

Uncovering a large set of genes that affect surface motility in Salmonella enterica serovar Typhimurium.

Qingfeng Wang, Susana Mariconda, Asaka Suzuki, Michael McClelland, Rasika M Harshey

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Flagellar motor remodeling during swarming requires FliL.bioRxiv : the preprint server for biology · 2023
    Article
  6. Article
  7. Microorganisms · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. mBio · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Swarming: flexible roaming plans.Journal of bacteriology · 2013
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Qingfeng WangSection of Molecular Genetics and Microbiology, and Institute of Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
Susana Mariconda
Asaka Suzuki
Michael McClelland
Rasika M Harshey
The University of Texas at Austin · USSidney Kimmel Cancer Center · US

Funding

Swarming as a model for surface-sensing in Salmonella typhimuriumR01GM057400 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI HARSHEY, RASIKA M · 1998 to 2012
$2.5M
DETAILED RESTRICTION MAP--SALMONELLA TYPHIMURIUM GENOMER01AI034829 · NIAID · SIDNEY KIMMEL CANCER CENTER · PI MCCLELLAND, MICHAEL · 1993 to 2006
$1.9M
Salmonella Gene Expression in Complex EnvironmentsR21AI057733 · NIAID · SIDNEY KIMMEL CANCER CENTER · PI MCCLELLAND, MICHAEL · 2004 to 2004
$345k
NIAID NIH HHS AI 057733NIAID NIH HHS AI 34829NIAID NIH HHS R01 AI034829NIAID NIH HHS R21 AI057733NIGMS NIH HHS GM 57400NIGMS NIH HHS R01 GM057400
6 · The paper itself

Abstract

We describe a large set of genes affecting motility in Salmonella enterica serovar Typhimurium. Identified in microarray experiments as displaying flagellar gene expression patterns or controlled by known flagellar regulators, we show that null mutations in these genes primarily affect swarming motility. Three genes function in chemotaxis.

Indexed as

ChemotaxisFlagellaGenes, BacterialLocomotionPoint MutationProtein Array AnalysisSalmonella typhimurium

Identifiers

PMID16980469
PMCPMC1636317
OpenAlexW2131112941

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.