Evidence map›Paper›PMID 16980460›Full record

ArticleJournal of bacteriology2006

Diguanylate cyclases control magnesium-dependent motility of Vibrio fischeri.

Therese M O'Shea, Adam H Klein, Kati Geszvain, Alan J Wolfe, Karen L Visick

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Functional analysis of cyclic diguanylate-modulating proteins inbioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Mutational Analysis ofJournal of bacteriology · 2022
    Article
  11. Article
  12. Genetic Manipulation of Vibrio fischeri.Current protocols in microbiology · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Therese M O'SheaDepartment of Microbiology and Immunology, Loyola University Chicago, 2160 S. First Ave., Bldg. 105, Maywood, IL 60153, USA.
Adam H Klein
Kati Geszvain
Alan J Wolfe
Karen L Visick
Loyola University Chicago · US

Funding

REQUIREMENTS FOR BACTERIAL COLONIZATION OF ANIMAL TISSUER01GM059690 · NIGMS · LOYOLA UNIVERSITY CHICAGO · PI VISICK, KAREN L · 2000 to 2013
$3.4M
Sensing central metabolic stressR01GM066130 · NIGMS · LOYOLA UNIVERSITY CHICAGO · PI WOLFE, ALAN J · 2004 to 2012
$2.7M
NIGMS NIH HHS GM066130NIGMS NIH HHS GM59690NIGMS NIH HHS R01 GM059690NIGMS NIH HHS R01 GM066130
6 · The paper itself

Abstract

Flagellar biogenesis and hence motility of Vibrio fischeri depends upon the presence of magnesium. In the absence of magnesium, cells contain few or no flagella and are poorly motile or nonmotile. To dissect the mechanism by which this regulation occurs, we screened transposon insertion mutants for those that could migrate through soft agar medium lacking added magnesium. We identified mutants with insertions in two distinct genes, VF0989 and VFA0959, which we termed mifA and mifB, respectively, for magnesium-dependent induction of flagellation. Each gene encodes a predicted membrane-associated protein with diguanylate cyclase activity. Consistent with that activity, introduction into V. fischeri of medium-copy plasmids carrying these genes inhibited motility. Furthermore, multicopy expression of mifA induced other phenotypes known to be correlated with diguanylate cyclase activity, including cellulose biosynthesis and biofilm formation. To directly test their function, we introduced the wild-type genes on high-copy plasmids into Escherichia coli. We assayed for the production of cyclic di-GMP using two-dimensional thin-layer chromatography and found that strains carrying these plasmids produced a small but reproducible spot that migrated with an R(f) value consistent with cyclic di-GMP that was not produced by strains carrying the vector control. Disruptions of mifA or mifB increased flagellin levels, while multicopy expression decreased them. Semiquantitative reverse transcription-PCR experiments revealed no significant difference in the amount of flagellin transcripts produced in either the presence or absence of Mg(2+) by either vector control or mifA-overexpressing cells, indicating that the impact of magnesium and cyclic-di-GMP primarily acts following transcription. Finally, we present a model for the roles of magnesium and cyclic di-GMP in the control of motility of V. fischeri.

Indexed as

Down-RegulationGene Expression Regulation, BacterialAliivibrio fischeriBacterial ProteinsBiofilmsCelluloseCyclic GMPEscherichia coliEscherichia coli ProteinsFlagellaGenetic VectorsLocomotionMagnesiumMutagenesis, InsertionalPhosphorus-Oxygen LyasesPlasmidsBacterial ProteinsCelluloseCyclic GMPdiguanylate cyclaseEscherichia coli ProteinsMagnesiumPhosphorus-Oxygen Lyases

Identifiers

PMID16980460
PMCPMC1698204
OpenAlexW2123649475

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.