Evidence map›Paper›PMID 16980400›Full record

ArticleGenetics2006

The large isoform of Drosophila melanogaster heterochromatin protein 2 plays a critical role in gene silencing and chromosome structure.

Christopher D Shaffer, Giovanni Cenci, Brandi Thompson, Gena E Stephens, Elizabeth E Slawson, Kwame Adu-Wusu, Maurizio Gatti, Sarah C R Elgin

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Heterochromatin-based silencing of a foreign tandem repeat inbioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. In praise of mealybugs.Journal of genetics · 2018
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Christopher D ShafferDepartment of Biology, Washington University, Saint Louis, MO 63130, USA. shaffer@biology.wustl.edu
Giovanni Cenci
Brandi Thompson
Gena E Stephens
Elizabeth E Slawson
Kwame Adu-Wusu
Maurizio Gatti
Sarah C R Elgin
Washington University in St. Louis · USIstituto Nazionale di Fisica Nucleare, Sezione di Lecce · ITSapienza University of Rome · ITUniversity of California, Berkeley · US

Funding

Formation, Structure and Function in HeterochromatinR01GM068388 · NIGMS · WASHINGTON UNIVERSITY · PI ELGIN, SARAH C.R. · 2003 to 2011
$3.9M
NIGMS NIH HHS GM068388NIGMS NIH HHS R01 GM068388
6 · The paper itself

Abstract

Drosophila melanogaster heterochromatin protein 2 (HP2) interacts with heterochromatin protein 1 (HP1). In polytene chromosomes, HP2 and HP1 colocalize at the chromocenter, telomeres, and the small fourth chromosome. We show here that HP2 is present in the arms as well as the centromeric regions of mitotic chromosomes. We also demonstrate that Su(var)2-HP2 exhibits a dosage-dependent modification of variegation of a yellow reporter transgene, indicating a structural role in heterochromatin formation. We have isolated and characterized 14 new mutations in the Su(var)2-HP2 gene. Using wm4h, many (but not all) mutant alleles show dominant Su(var) activity. Su(var)2-HP2 mutant larvae show a wide variety of mitotic abnormalities, but not the telomere fusion seen in larvae deficient for HP1. The Su(var)2-HP2 gene codes for two isoforms: HP2-L (approximately 365 kDa) and HP2-S (approximately 175 kDa), lacking exons 5 and 6. In general, mutations that affect only the larger isoform result in more pronounced defects than do mutations common to both isoforms. This suggests that an imbalance between large and small isoforms is particularly deleterious. These results indicate a role for HP2 in the structural organization of chromosomes and in heterochromatin-induced gene silencing and show that the larger isoform plays a critical role in these processes.

Indexed as

ChromosomesGene SilencingAllelesAnimalsChromosomal Proteins, Non-HistoneCrosses, GeneticDrosophila melanogasterDrosophila ProteinsFluorescent Antibody TechniqueFluorescent DyesGene DosageGenetic MarkersGreen Fluorescent ProteinsIndolesLarvaMitosisChromosomal Proteins, Non-HistoneDAPIDrosophila ProteinsFluorescent DyesGenetic MarkersGreen Fluorescent Proteinsheterochromatin protein 2, DrosophilaIndolesProtein Isoforms

Identifiers

PMID16980400
PMCPMC1667101
OpenAlexW2134400717

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.