Evidence map›Paper›PMID 16980389›Full record

ArticleGenetics2006

SWAN-1, a Caenorhabditis elegans WD repeat protein of the AN11 family, is a negative regulator of Rac GTPase function.

Yieyie Yang, Jiamiao Lu, Joel Rovnak, Sandra L Quackenbush, Erik A Lundquist

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.4field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Control of developmental networks by Rac/Rho small GTPases: How cytoskeletal changes during embryogenesis are orchestrated.BioEssays : news and reviews in molecular, cellular and developmental biology · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yieyie YangDepartment of Molecular Biosciences, University of Kansas, Lawrence 66045, USA.
Jiamiao Lu
Joel Rovnak
Sandra L Quackenbush
Erik A Lundquist
University of Kansas · USColorado State University · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ACKLEY, BRIAN DOUGLAS · 2001 to 2011
$38.1M
CYTOSKELETAL SIGNALING AND AXON GUIDANCER01NS040945 · NINDS · UNIVERSITY OF KANSAS LAWRENCE · PI LUNDQUIST, ERIK A · 2001 to 2013
$3.3M
Cytoskeletal Signaling and Axon GuidanceR56NS040945 · NINDS · UNIVERSITY OF KANSAS LAWRENCE · PI LUNDQUIST, ERIK A · 2009 to 2009
$360k
NCRR NIH HHS P20 RR016475NINDS NIH HHS NS40945NINDS NIH HHS R01 NS040945NINDS NIH HHS R56 NS040945
6 · The paper itself

Abstract

Rac GTPases are key regulators of cell shape and cytoskeletal organization. While some regulators of Rac activity are known, such as GTPase-activating proteins (GAPs) that repress Rac activity, other Rac regulators remain to be identified. The novel Caenorhabditis elegans WD-repeat protein SWAN-1 was identified in a yeast two-hybrid screen with the LIM domains of the Rac effector UNC-115/abLIM. SWAN-1 was found to also associate physically with Rac GTPases. The swan-1(ok267) loss-of-function mutation suppressed defects caused by the hypomorphic ced-10(n1993) allele and enhanced ectopic lamellipodia and filopodia formation induced by constitutively active Rac in C. elegans neurons. Furthermore, SWAN-1(+) transgenic expression suppressed the effects of overactive Rac, including ectopic lamellipodia and filopodia formation in C. elegans neurons, ectopic lamellipodia formation in cultured mammalian fibroblasts, and cell polarity and actin cytoskeleton defects in yeast. These studies indicate that SWAN-1 is an inhibitor of Rac GTPase function in cellular morphogenesis and cytoskeletal organization. While broadly conserved across species, SWAN-1 family members show no sequence similarity to previously known Rac inhibitors.

Indexed as

ActinsAmino Acid SequenceAnimalsAnimals, Genetically ModifiedBase SequenceBromodomain Containing ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsCytoskeletonFemaleImmunoprecipitationMembrane ProteinsMicrofilament ProteinsMolecular Sequence DataMorphogenesisNeuronsActinsBromodomain Containing ProteinsCaenorhabditis elegans ProteinsMembrane ProteinsMicrofilament ProteinsProto-Oncogene Proteinsrac GTP-Binding ProteinsUNC-115 protein, C elegansWDR11 protein, human

Identifiers

PMID16980389
PMCPMC1698646
OpenAlexW2108077020

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.