Evidence map›Paper›PMID 16977336›Full record

ArticleEMBO reports2006

Coexistence of two protein folding states in the crystal structure of ribosomal protein L20.

Youri Timsit, Fréderic Allemand, Claude Chiaruttini, Mathias Springer

Abstract readComparative Study
In one paragraph

Article in EMBO reports, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Review
  3. Protein Fold Usages in Ribosomes: Another Glance to the Past.International journal of molecular sciences · 2024
    Article
  4. Towards the Idea of Molecular Brains.International journal of molecular sciences · 2021
    Review
  5. Article
  6. Nervous-Like Circuits in the Ribosome Facts, Hypotheses and Perspectives.International journal of molecular sciences · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Transformer proteins.Cell cycle (Georgetown, Tex.) · 2012
    Article
  12. Article
  13. Review
  14. Article
  15. SDSL-ESR-based protein structure characterization.European biophysics journal : EBJ · 2010
    Review
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Youri TimsitLaboratoire de Cristallographie UPR9080, Institut de Biologie Physico-Chimique CNRS, 13, rue Pierre et Marie Curie, Paris 75005, France. timsit@ibpc.fr
Fréderic Allemand
Claude Chiaruttini
Mathias Springer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent finding of intrinsically unstructured proteins defies the classical structure-function paradigm. However, owing to their flexibility, intrinsically unstructured proteins generally escape detailed structural investigations. Consequently little is known about the extent of conformational disorder and its role in biological functions. Here, we present the X-ray structure of the unbound ribosomal protein L20, the long basic amino-terminal extension of which has been previously interpreted as fully disordered in the absence of RNA. This study provides the first detailed picture of two protein folding states trapped together in a crystal and indicates that unfolding occurs in discrete regions of the whole protein, corresponding mainly to RNA-binding residues. The electrostatic destabilization of the long alpha-helix and a structural communication between the two L20 domains are reminiscent of those observed in calmodulin. The detailed comparison of the two conformations observed in the crystal provides new insights into the role of unfolded extensions in ribosomal assembly.

Indexed as

Protein FoldingBacterial ProteinsCrystallography, X-RayData CollectionDeinococcusEscherichia coliModels, BiologicalModels, MolecularOptical Rotatory DispersionProtein BindingProtein ConformationProtein Structure, SecondaryProtein Structure, TertiaryRibosomal ProteinsRNA-Binding ProteinsRNA, Ribosomal, 23SBacterial ProteinsL20 ribosomal protein, bacteriaRibosomal ProteinsRNA-Binding ProteinsRNA, Ribosomal, 23S

Identifiers

PMID16977336
PMCPMC1618378

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.