Evidence map›Paper›PMID 16971480›Full record

ArticleJournal of medical genetics2007

Screening of calpain-3 autolytic activity in LGMD muscle: a functional map of CAPN3 gene mutations.

M Fanin, A C Nascimbeni, C Angelini

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. RecurrentInternational journal of molecular sciences · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Gene Correction of LGMD2A Patient-Specific iPSCs for the Development of Targeted Autologous Cell Therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2019
    Article
  10. Article
  11. Article
  12. Natural history of LGMD2A for delineating outcome measures in clinical trials.Annals of clinical and translational neurology · 2016
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. How to tackle the diagnosis of limb-girdle muscular dystrophy 2A.European journal of human genetics : EJHG · 2009
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

M FaninDepartment of Neurosciences, University of Padova, Venetian Institute of Molecular Medicine, Padova, Italy. marina.fanin@unipd.it
A C Nascimbeni
C Angelini
Veneto Institute of Molecular Medicine · ITUniversity of Padua · IT

Funding

Telethon GTB07001Telethon GUP030516
6 · The paper itself

Abstract

backgroundThe diagnosis of calpainopathy is obtained by identifying calpain-3 protein deficiency or CAPN3 gene mutations. However, in many patients with limb girdle muscular dystrophy type 2A (LGMD2A), the calpain-3 protein quantity is normal because loss-of-function mutations cause its enzymatic inactivation. The identification of such patients is difficult unless a functional test suggests pursuing a search for mutations. MATERIALS AND

methodsA functional in vitro assay, which was able to test calpain-3 autolytic function, was used to screen a large series of muscle biopsy specimens from patients with unclassified LGMD/hyperCKaemia who have previously shown normal calpain-3 protein quantity.

resultsOf 148 muscle biopsy specimens tested,17 samples (11%) had lost normal autolytic function. CAPN3 gene mutations were identified in 15 of 17 patients (88%), who account for about 20% of the total patients with LGMD2A diagnosed in our series.

conclusionsThe loss of calpain-3 autolytic activity is highly predictive of primary calpainopathy, and the use of this test as part of calpainopathy diagnosis would improve the rate of disease detection markedly. This study provides the first evidence of the pathogenetic effect of specific CAPN3 gene mutations on the corresponding protein function in LGMD2A muscle and offers new insights into the structural-functional relationship of the gene and protein regions that are crucial for the autolytic activity of calpain-3.

Indexed as

Mutation, MissenseAge of OnsetAmino Acid SubstitutionBase SequenceBiopsyCalpainExonsHumansModels, MolecularMuscle ProteinsMuscle, SkeletalMuscular Dystrophies, Limb-GirdlePolymorphism, Single-Stranded ConformationalProtein Structure, TertiaryRetrospective StudiesCalpainCAPN3 protein, humanMuscle Proteins

Identifiers

PMID16971480
PMCPMC2597906
OpenAlexW1976575500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.