Evidence map›Paper›PMID 16971462›Full record

ArticleNucleic acids research2006

CK2-mediated stimulation of Pol I transcription by stabilization of UBF-SL1 interaction.

Chih-Yin Lin, Sonia Navarro, Sita Reddy, Lucio Comai

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 49 citations in OpenAlex.

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  17. Akt activation enhances ribosomal RNA synthesis through casein kinase II and TIF-IA.Proceedings of the National Academy of Sciences of the United States of America · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Chih-Yin LinDepartment of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California, 2250 Alcazar Street, Los Angeles, CA 90033, USA.
Sonia Navarro
Sita Reddy
Lucio Comai
University of Southern California · US

Funding

VIRAL REGULATION OF RIBOSOMAL RNA TRANSCRIPTIONR01GM053949 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI COMAI, LUCIO · 1998 to 2007
$1.6M
NIGMS NIH HHS GM053949NIGMS NIH HHS R01 GM053949
6 · The paper itself

Abstract

High levels of rRNA synthesis by RNA polymerase I are important for cell growth and proliferation. In vitro studies have indicated that the formation of a stable complex between the HMG box factor [Upstream binding factor (UBF)] and SL1 at the rRNA gene promoter is necessary to direct multiple rounds of Pol I transcription initiation. The recruitment of SL1 to the promoter occurs through protein interactions with UBF and is regulated by phosphorylation of UBF. Here we show that the protein kinase CK2 co-immunoprecipitates with the Pol I complex and is associated with the rRNA gene promoter. Inhibition of CK2 kinase activity reduces Pol I transcription in cultured cells and in vitro. Significantly, CK2 regulates the interaction between UBF and SL1 by counteracting the inhibitory effect of HMG boxes five and six through the phosphorylation of specific serines located at the C-terminus of UBF. Transcription reactions with immobilized templates indicate that phosphorylation of CK2 phosphoacceptor sites in the C-terminal domain of UBF is important for promoting multiple rounds of Pol I transcription. These data demonstrate that CK2 is recruited to the rRNA gene promoter and directly regulates Pol I transcription re-initiation by stabilizing the association between UBF and SL1.

Indexed as

Transcription, GeneticBinding SitesCasein Kinase IICell LineGenes, rRNAHumansMutationPhosphorylationPol1 Transcription Initiation Complex ProteinsPromoter Regions, GeneticProtein BindingProtein Structure, TertiaryRNA Polymerase ITranscription FactorsCasein Kinase IIPol1 Transcription Initiation Complex ProteinsRNA Polymerase IRRN3 protein, humanTranscription Factorstranscription factor UBFtranscription initiation factor TIF-IB

Identifiers

PMID16971462
PMCPMC1635259
OpenAlexW2097259918

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.