Evidence map›Paper›PMID 16969709›Full record

ArticleExtremophiles : life under extreme conditions2007

HMG-CoA reductase is regulated by salinity at the level of transcription in Haloferax volcanii.

Kelly A Bidle, Thomas E Hanson, Koko Howell, Jennifer Nannen

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Extremophiles : life under extreme conditions, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 36 citations in OpenAlex.

  1. A New Era for Using Natural Pigments: The Case of the CBiotechnology and applied biochemistry · 2026
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  2. Microbial Bacterioruberin: A Comprehensive Review.Indian journal of microbiology · 2024
    Review
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  6. Frontiers in microbiology · 2020
    Article
  7. In Search for the Membrane Regulators of Archaea.International journal of molecular sciences · 2019
    Review
  8. Article
  9. Lipid sugar carriers at the extremes: The phosphodolichols Archaea use in N-glycosylation.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2017
    Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kelly A BidleDepartment of Biology, Rider University, Lawrenceville, NJ 08648, USA. kbidle@rider.edu
Thomas E Hanson
Koko Howell
Jennifer Nannen
Rider University · USUniversity of Delaware · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The moderately halophilic archaeon Haloferax volcanii was surveyed for protein profile changes correlated with growth at high and low salinity. A single polypeptide with an approximate mass of 46 kDa was conspicuously more abundant during growth at high salinity. This protein was identified as HMG-CoA reductase (HMGR), encoded by the hmgR gene. HMGR is a key enzyme in the mevalonate pathway of isoprenoid biosynthesis, the sole route in haloarchaea for lipid and carotenoid production. Enzymatic assays confirmed that HMGR activity is more abundant in cells grown at high salinity. Low salt cultures of H. volcanii contained lower amounts of hmgR transcript compared to cells grown in high salt suggesting that the observed regulation occurs at the level of transcription. Paradoxically, both lipid and carotenoid content decreased in H. volcanii grown at high salinity despite the increased levels of HMGR specific activity. To our knowledge, this is the first report demonstrating that the expression of HMGR is regulated in response to non-optimal salinity in a halophilic archaeon.

Indexed as

Gene Expression Regulation, ArchaealGene Expression Regulation, EnzymologicTranscription, GeneticAdaptation, PhysiologicalArchaeal ProteinsCarotenoidsCell MembraneHaloferax volcaniiHydroxymethylglutaryl CoA ReductasesLipid MetabolismReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSodium ChlorideArchaeal ProteinsCarotenoidsHydroxymethylglutaryl CoA ReductasesRNA, MessengerSodium Chloride

Identifiers

PMID16969709
OpenAlexW1998640247

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.