Evidence map›Paper›PMID 1696716›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1990

Molecular analysis of the hydrogenosomal ferredoxin of the anaerobic protist Trichomonas vaginalis.

P J Johnson, C E d'Oliveira, T E Gorrell, M Müller

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 105 citations in OpenAlex.

  1. Review
  2. Article
  3. Biochemistry and evolution of anaerobic energy metabolism in eukaryotes.Microbiology and molecular biology reviews : MMBR · 2012
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. A spliceosomal intron in Giardia lamblia.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  10. Hydrogenases and hydrogen metabolism of cyanobacteria.Microbiology and molecular biology reviews : MMBR · 2002
    Review
  11. Article
  12. Why metronidazole is active against both bacteria and parasites.Antimicrobial agents and chemotherapy · 1999
    Review
  13. Review
  14. Article
  15. Article
  16. Transient and selectable transformation of the parasitic protist Trichomonas vaginalis.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  17. Article
  18. A common evolutionary origin for mitochondria and hydrogenosomes.Proceedings of the National Academy of Sciences of the United States of America · 1996
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

P J JohnsonDepartment of Microbiology and Immunology, University of California School of Medicine, Los Angeles 90024.
C E d'Oliveira
T E Gorrell
M Müller
University of California, Los Angeles · US

Funding

Biogenesis of Hydrogenosomes of a Trichomonad ParasiteR37AI027857 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 2004 to 2013
$4.5M
BIOCHEMICAL CYTOLOGY OF TRICHOMONAS VAGINALISR01AI011942 · NIAID · ROCKEFELLER UNIVERSITY · PI MULLER, MIKLOS · 1985 to 2003
$1.3M
BIOGENESIS OF HYDROGENOSOMES OF A TRICHOMONAD PARASITER01AI027857 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 1994 to 2003
$1.3M
BIOGENESIS OF HYDROGENOSOMES OF A TRICHOMONAD PARASITER29AI027857 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 1989 to 1993
–
NIAID NIH HHS AI 11942NIAID NIH HHS AI 27857
6 · The paper itself

Abstract

We have determined the primary structure of the [2Fe-2S]ferredoxin of the anaerobic protist Trichomonas vaginalis. This protein, situated in the hydrogenosome, is composed of 93 amino acids. A comparison of T. vaginalis ferredoxin with greater than 80 other ferredoxins shows the closest similarity to [2Fe-2S]putidaredoxin of the aerobic bacterium Pseudomonas putida and a lesser one to mitochondrial [2Fe-2S]ferredoxins of vertebrates. This similarity is reflected in the overall primary structure and in the spacing of cysteine residues coordinating the iron-sulfur center. The primary structure, but not the environment of the iron-sulfur center, also shows similarity with [2Fe-2S]ferredoxins of photosynthetic organisms and halobacteria. We have cloned and analyzed the T. vaginalis ferredoxin gene. The gene is present in a single copy and devoid of introns. It gives rise to a transcript with unusually short 5' and 3' untranslated regions of 16 and 18 nucleotides, respectively. DNA sequence analysis of the gene predicts an additional 8 amino acids at the amino terminus which are absent from the purified protein. This amino-terminal region of the protein is characterized by properties typical of mitochondrial presequences.

Indexed as

Amino Acid SequenceAnaerobiosisAnimalsBase SequenceBlotting, SouthernDNAFerredoxinsGene LibraryMolecular Sequence DataProtein ConformationRestriction MappingRNASequence Homology, Nucleic AcidTrichomonas vaginalisDNAFerredoxinsRNA

Identifiers

PMID1696716
PMCPMC54479
OpenAlexW2030359691

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.