Evidence map›Paper›PMID 16966379›Full record

ArticleMolecular and cellular biology2006

A new function in translocation for the mitochondrial i-AAA protease Yme1: import of polynucleotide phosphorylase into the intermembrane space.

Robert N Rainey, Jenny D Glavin, Hsiao-Wen Chen, Samuel W French, Michael A Teitell, Carla M Koehler

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 106 citations in OpenAlex.

  1. Review
  2. YME1L1 Dysfunction Associated With 3-Methylglutaconic Aciduria.Journal of inherited metabolic disease · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. SP1 and NFY Regulate the Expression ofInternational journal of molecular sciences · 2022
    Article
  11. AAA+ proteins: one motor, multiple ways to work.Biochemical Society transactions · 2022
    Review
  12. Review
  13. Review
  14. Article
  15. Review
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  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Robert N RaineyDepartment of Chemistry and Biochemistry, UCLA, Los Angeles, CA 90095-1569, USA.
Jenny D Glavin
Hsiao-Wen Chen
Samuel W French
Michael A Teitell
Carla M Koehler
California NanoSystems Institute · USInstitute of Molecular Biology · BG

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Biogenesis of the mitochondrial inner membrane diversity supplementR01GM061721 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOEHLER, CARLA M · 2000 to 2025
$8.1M
RNA trafficking in mitochondriaR01GM073981 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Carla M Koehler, MICHAEL A TEITELL · 2006 to 2026
$5.1M
TCL1 ONCOGENE IN B LYMPHOCYTE DEVELOPMENT AND NEOPLASIAR01CA090571 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TEITELL, MICHAEL A · 2002 to 2015
$3.8M
A NOVEL MECHANISM OF TCL1 TUMORIGENESISR01CA107300 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TEITELL, MICHAEL A · 2004 to 2008
$1.4M
PREDOCTORAL FELLOWSHIPS FOR STUDENTS WITH DISABILITIESF31HD041889 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RAINEY, ROBERT N · 2003 to 2006
$116k
NCI NIH HHS R01 CA090571NCI NIH HHS R01 CA107300NCI NIH HHS R01CA107300NCI NIH HHS R01CA90571NICHD NIH HHS F31 HD041889NICHD NIH HHS HD041889NIGMS NIH HHS GM07185NIGMS NIH HHS R01 GM061721NIGMS NIH HHS R01GM061721NIGMS NIH HHS R01 GM073981NIGMS NIH HHS R01GM073981NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

Polynucleotide phosphorylase (PNPase) is an exoribonuclease and poly(A) polymerase postulated to function in the cytosol and mitochondrial matrix. Prior overexpression studies resulted in PNPase localization to both the cytosol and mitochondria, concurrent with cytosolic RNA degradation and pleiotropic cellular effects, including growth inhibition and apoptosis, that may not reflect a physiologic role for endogenous PNPase. We therefore conducted a mechanistic study of PNPase biogenesis in the mitochondrion. Interestingly, PNPase is localized to the intermembrane space by a novel import pathway. PNPase has a typical N-terminal targeting sequence that is cleaved by the matrix processing peptidase when PNPase engaged the TIM23 translocon at the inner membrane. The i-AAA protease Yme1 mediated translocation of PNPase into the intermembrane space but did not degrade PNPase. In a yeast strain deleted for Yme1 and expressing PNPase, nonimported PNPase accumulated in the cytosol, confirming an in vivo role for Yme1 in PNPase maturation. PNPase localization to the mitochondrial intermembrane space suggests a unique role distinct from its highly conserved function in RNA processing in chloroplasts and bacteria. Furthermore, Yme1 has a new function in protein translocation, indicating that the intermembrane space harbors diverse pathways for protein translocation.

Indexed as

Translocation, GeneticAdenosine TriphosphatasesAmino Acid SequenceATP-Dependent ProteasesCarrier ProteinsMembrane Transport ProteinsMetalloendopeptidasesMitochondriaMitochondrial Precursor Protein Import Complex ProteinsMitochondrial Processing PeptidaseModels, BiologicalMolecular Sequence DataPeptide HydrolasesPolyribonucleotide NucleotidyltransferaseProtein TransportSaccharomyces cerevisiaeAdenosine TriphosphatasesATP-Dependent ProteasesCarrier ProteinsMembrane Transport ProteinsMetalloendopeptidasesMitochondrial Precursor Protein Import Complex ProteinsMitochondrial Processing PeptidasePeptide HydrolasesPolyribonucleotide NucleotidyltransferaseSaccharomyces cerevisiae ProteinsTetrahydrofolate DehydrogenaseTIM23 protein, S cerevisiaeYME1 protein, S cerevisiae

Identifiers

PMID16966379
PMCPMC1636789
OpenAlexW2038385924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.