Evidence map›Paper›PMID 16963561›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Reconstitution of full-round uridine-deletion RNA editing with three recombinant proteins.

Xuedong Kang, Guanghan Gao, Kestrel Rogers, Arnold M Falick, Sharleen Zhou, Larry Simpson

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Inhibitors of RNA editing as potential chemotherapeutics against trypanosomatid pathogens.International journal for parasitology. Drugs and drug resistance · 2012
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Xuedong KangDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA 90095, USA.
Guanghan Gao
Kestrel Rogers
Arnold M Falick
Sharleen Zhou
Larry Simpson
University of California, Los Angeles · USHoward Hughes Medical Institute · USInstitute of Molecular and Cell Biology · RU

Funding

FUNCTION OF THE KINETOPLAST IN THE HEMOFLAGELLATESR01AI009102 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SIMPSON, LARRY · 1985 to 2013
$7.0M
CHITOSOMES AND REGULATED SECRETION IN S CEREVISIAEF32AI009102 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI ZIMAN, MICHAEL · 1994 to 1996
–
FUNCTION OF THE KINETOPLAST IN THE HEMOFLAGELLATESR37AI009102 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SIMPSON, LARRY · 1990 to 1999
–
NIAID NIH HHS F32 AI009102NIAID NIH HHS R01 AI009102NIAID NIH HHS R37 AI009102
6 · The paper itself

Abstract

Uridine (U)-insertion/deletion RNA editing in trypanosome mitochondria involves an initial cleavage of the preedited mRNA at specific sites determined by the annealing of partially complementary guide RNAs. An involvement of two RNase III-containing core editing complex (L-complex) proteins, MP90 (KREPB1) and MP61 (KREPB3) in, respectively, U-deletion and U-insertion editing, has been suggested, but these putative enzymes have not been characterized or expressed in active form. Recombinant MP90 proteins from Trypanosoma brucei and Leishmania major were expressed in insect cells and cytosol of Leishmania tarentolae, respectively. These proteins were active in specifically cleaving a model U-deletion site and not a U-insertion site. Deletion or mutation of the RNase III motif abolished this activity. Full-round guide RNA (gRNA)-mediated in vitro U-deletion editing was reconstituted by a mixture of recombinant MP90 and recombinant RNA editing exonuclease I from L. major, and recombinant RNA editing RNA ligase 1 from L. tarentolae. MP90 is designated REN1, for RNA-editing nuclease 1.

Indexed as

RNA EditingAmino Acid SequenceAnimalsBase SequenceEosinophil Cationic ProteinGene Expression RegulationLeishmaniaMitochondriaMolecular Sequence DataProtozoan ProteinsRecombinant ProteinsRNARNA-Binding ProteinsRNA InterferenceTrypanosoma brucei bruceiUridineEosinophil Cationic ProteinProtozoan ProteinsRecombinant ProteinsRNARNA-Binding ProteinsUridine

Identifiers

PMID16963561
PMCPMC1599893
OpenAlexW2168536058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.