Evidence map›Paper›PMID 16960717›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2006

Refined mapping of the Pierce's disease resistance locus, PdR1, and Sex on an extended genetic map of Vitis rupestris x V. arizonica.

S Riaz, A F Krivanek, K Xu, M A Walker

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Monitoring and Genotyping of Wild Grapevine (Plants (Basel, Switzerland) · 2024
    Article
  6. Article
  7. Article
  8. Genetic changes in the genusFrontiers in plant science · 2022
    Review
  9. Article
  10. Multiple independent recombinations led to hermaphroditism in grapevine.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Frontiers in genetics · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. High-density linkage maps and loci for berry color and flower sex in muscadine grape (Vitis rotundifolia).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  18. PeerJ · 2019
    Article
  19. Article
  20. Frontiers in plant science · 2018
    Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors.

S RiazDepartment of Viticulture and Enology, University of California, Davis, CA 95616, USA.
A F Krivanek
K Xu
M A Walker

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A framework genetic map based on genomic DNA-derived SSR, EST-derived SSR, EST-STS and EST-RFLP markers was developed using 181 genotypes generated from D8909-15 (female) x F8909-17 (male), the '9621' population. Both parents are half siblings with a common female parent, Vitis rupestris 'A. de Serres', and different male parents (forms of V. arizonica). A total of 542 markers were tested, and 237 of them were polymorphic for the female and male parents. The female map was developed with 159 mapped markers covering 865.0 cM with an average marker distance of 5.4 cM in 18 linkage groups. The male map was constructed with 158 mapped molecular markers covering 1055.0 cM with an average distance of 6.7 cM in 19 linkage groups. The consensus '9621' map covered 1154.0 cM with 210 mapped molecular markers in 19 linkage groups, with average distance of 5.5 cM. Ninety-four of the 210 markers on the consensus map were new. The 'Sex' expression locus segregated as single major gene was mapped to linkage group 2 on the consensus and the male map. PdR1, a major gene for resistance to Pierce's disease, caused by the bacterium Xylella fastidiosa, was mapped to the linkage group 14 between markers VMCNg3h8 and VVIN64, located 4.3 and 2.7 cM away from PdR1, respectively. Differences in segregation distortion of markers were also compared between parents, and three clusters of skewed markers were observed on linkage groups 6, 7 and 14.

Indexed as

Chromosome MappingHybridization, GeneticSexXylellaDNA PrimersExpressed Sequence TagsGenes, PlantGenetic MarkersImmunity, InnatePlant DiseasesPolymorphism, Restriction Fragment LengthVitisDNA PrimersGenetic Markers

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.