Evidence map›Paper›PMID 16957775›Full record

ArticleThe EMBO journal2006

bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection.

Hironori Kaminaka, Christian Näke, Petra Epple, Jan Dittgen, Katia Schütze, Christina Chaban, Ben F Holt, Thomas Merkle, Eberhard Schäfer, Klaus Harter and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 119 papers.

0numbers the graph read from it
0cells of the map it votes in
119citing papers in PubMed
19.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

119 citing papers in PubMed, 270 citations in OpenAlex.

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  8. Genome-Wide Identification and Expression Profiling ofInternational journal of molecular sciences · 2025
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  11. Wheat bZIPC1 interacts with FT2 and contributes to the regulation of spikelet number per spike.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  12. Article
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  14. The Role of Plant Transcription Factors in the Fight against Plant Viruses.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Article
  17. A petunia transcription factor,Horticulture research · 2023
    Article
  18. Article
  19. Review
  20. Article

59 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Hironori KaminakaDepartment of Biology, Curriculum in Genetics and Carolina Center for Genome Sciences, CB#3280, University of North Carolina, Chapel Hill, NC 27599, USA.
Christian Näke
Petra Epple
Jan Dittgen
Katia Schütze
Christina Chaban
Ben F Holt
Thomas Merkle
Eberhard Schäfer
Klaus Harter
Jeffery L Dangl
University of Freiburg · DEUniversity of North Carolina at Chapel Hill · USBielefeld University · DEInstitut für Pflanzenkultur (Germany) · DE

Funding

GENETICS OF PROGRAMMED CELL DEATH IN ARABIDOPSISR01GM057171 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DANGL, JEFFERY L. · 1998 to 2010
$3.2M
NIGMS NIH HHS R01 GM057171NIGMS NIH HHS R01-GM057171
6 · The paper itself

Abstract

Plants use sophisticated strategies to balance responses to oxidative stress. Programmed cell death, including the hypersensitive response (HR) associated with successful pathogen recognition, is one cellular response regulated by reactive oxygen in various cellular contexts. The Arabidopsis basic leucine zipper (bZIP) transcription factor AtbZIP10 shuttles between the nucleus and the cytoplasm and binds consensus G- and C-box DNA sequences. Surprisingly, AtbZIP10 can be retained outside the nucleus by LSD1, a protein that protects Arabidopsis cells from death in the face of oxidative stress signals. We demonstrate that AtbZIP10 is a positive mediator of the uncontrolled cell death observed in lsd1 mutants. AtbZIP10 and LSD1 act antagonistically in both pathogen-induced HR and basal defense responses. LSD1 likely functions as a cellular hub, where its interaction with AtbZIP10 and additional, as yet unidentified, proteins contributes significantly to plant oxidative stress responses.

Indexed as

ApoptosisArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsCytoplasmDNA-Binding ProteinsGenes, PlantGreen Fluorescent ProteinsMutationOomycetesOxidative StressPlant DiseasesPlants, Genetically ModifiedRecombinant Fusion ProteinsSaccharomyces cerevisiaeTranscription FactorsArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsGreen Fluorescent ProteinsLSD1 protein, ArabidopsisRecombinant Fusion ProteinsTranscription Factors

Identifiers

PMID16957775
PMCPMC1570446
OpenAlexW2167746422

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.