Evidence map›Paper›PMID 16956945›Full record

ArticleJournal of virology2006

Epstein-Barr virus EBNA-3C is targeted to and regulates expression from the bidirectional LMP-1/2B promoter.

Carmilia Jiménez-Ramírez, Andrew J Brooks, Linus Plym Forshell, Konstantin Yakimchuk, Bo Zhao, Tacha Zi Fulgham, Clare E Sample

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Multiple sclerosis and infection: history, EBV, and the search for mechanism.Microbiology and molecular biology reviews : MMBR · 2025
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Epstein-Barr virus nuclear antigen 3C binds to BATF/IRF4 or SPI1/IRF4 composite sites and recruits Sin3A to repress CDKN2A.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  8. Article
  9. Article
  10. Article
  11. Epstein-Barr virus nuclear antigen 3C regulated genes in lymphoblastoid cell lines.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  12. Article
  13. Article
  14. Epstein-Barr virus nuclear protein EBNA3C residues critical for maintaining lymphoblastoid cell growth.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Carmilia Jiménez-RamírezDepartment of Biochemistry, MS 340, 332 North Lauderdale Street, Memphis, TN 38105, USA.
Andrew J Brooks
Linus Plym Forshell
Konstantin Yakimchuk
Bo Zhao
Tacha Zi Fulgham
Clare E Sample
St. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
FUNCTION OF EBV EBNA-3C IN B CELL IMMORTALIZATIONR01CA056645 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, CLARE E · 1998 to 2008
$1.8M
FUNCTIONS OF EBV PROTEINS IN B-CELL IMMORTALIZATIONR29CA056645 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SAMPLE, CLARE E · 1992 to 1996
–
NCI NIH HHS CA21765NCI NIH HHS CA56645NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA056645
6 · The paper itself

Abstract

Epstein-Barr virus (EBV) nuclear antigen 3C (EBNA-3C) is essential for EBV-mediated immortalization of human B lymphocytes and regulates both the cell cycle and transcription. Transient reporter gene assays have implicated a pivotal role for EBNA-3C in the regulation of transcription of the majority of latency-associated genes expressed during the EBV growth program, including the viral oncoprotein LMP-1. To examine the regulation of latency gene expression by EBNA-3C, we generated an EBV-positive cell line that inducibly expresses EBNA-3C. This cell line allowed us to examine expression from the endogenous latency gene promoters in the context of an actual latent infection and the presence of other EBNA proteins, in particular EBNA-2, which is presumed to coregulate transcription with EBNA-3C. EBNA-3C induced the expression of both LMP-1 and LMP-2B mRNAs from the bidirectional LMP-1/LMP-2B promoter. In contrast, no effect was seen on expression from the common EBNA promoter Cp, which is responsive to EBNA-3C in reporter assays. Activation of LMP expression was not the consequence of increases in EBNA-2, PU.1 or Spi-B transcription factors, all of which are believed to be critical for activation of LMP-1. Chromatin immunoprecipitation assays furthermore indicated that EBNA-3C is present at the bidirectional LMP-1/LMP-2B promoter. These results indicate that EBNA-3C directly activates the expression of LMP-1 and LMP-2B but is unlikely to significantly regulate EBNA expression via Cp under normal growth conditions.

Indexed as

Gene Expression Regulation, ViralPromoter Regions, GeneticAntigens, ViralCell Line, TumorChromatin ImmunoprecipitationDNA-Binding ProteinsDNA, ViralElectrophoresis, Polyacrylamide GelEpstein-Barr Virus Nuclear AntigensHerpesvirus 4, HumanHumansImmunoblottingProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Reverse Transcriptase Polymerase Chain ReactionRNA, ViralAntigens, ViralDNA-Binding ProteinsDNA, ViralEBNA-2 protein, Human herpesvirus 4EBNA-3C, epstein-barr virusEBV-associated membrane antigen, Epstein-Barr virusEpstein-Barr Virus Nuclear AntigensProto-Oncogene ProteinsProto-Oncogene Protein Spi-1RNA, ViralSPIB protein, humanTrans-ActivatorsTranscription FactorsViral Matrix ProteinsViral Proteins

Identifiers

PMID16956945
PMCPMC1642179
OpenAlexW2167077333

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.