Evidence map›Paper›PMID 16953557›Full record

ArticleMolecular medicine (Cambridge, Mass.)

Gene expression analysis in HBV transgenic mouse liver: a model to study early events related to hepatocarcinogenesis.

Michele Barone, Daniela Spano, Maria D'Apolito, Marta Centra, Carla Lasalandra, Mario Capasso, Alfredo Di Leo, Stefano Volinia, Diego Arcelli, Natalia Rosso and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Molecular medicine (Cambridge, Mass.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. The perplexity of targeting genetic alterations in hepatocellular carcinoma.Medical oncology (Northwood, London, England) · 2020
    Article
  9. Article
  10. Review
  11. Liver cancer-related gene CYP2E1 expression in HBV transgenic mice with acute liver injury.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
  12. Article
  13. Expression of cytokines in mouse hepatitis B virus X gene-transfected model.Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban · 2013
    Article
  14. Hepatitis B virus genome asymmetry in hepatocellular carcinoma.Middle East journal of digestive diseases · 2012
    Article
  15. Article
  16. Hepatocellular carcinoma: insight from animal models.Nature reviews. Gastroenterology & hepatology · 2011
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Michele BaroneSezione di Gastroenterologia, Dipartimento di Emergenza e di Trapianto d'Organo, Università di Bari, Bari, Italia.
Daniela Spano
Maria D'Apolito
Marta Centra
Carla Lasalandra
Mario Capasso
Alfredo Di Leo
Stefano Volinia
Diego Arcelli
Natalia Rosso
Antonio Francavilla
Claudio Tiribelli
Achille Iolascon
Ceinge Biotecnologie Avanzate (Italy) · ITUniversity of Foggia · ITUniversity of Bari Aldo Moro · ITUniversity of Ferrara · ITUniversity of Trieste · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B virus (HBV) is one of the major etiological factors responsible for the development of hepatocellular carcinoma (HCC). We used a transgenic mouse, containing HBV sequences, as a model system to unravel the molecular mechanisms of hepatocarcinogenesis induced by HBV. We chose this animal model because it consistently develops liver cancer after intermediate steps that mimic the natural history of HBV infection in humans. In this study, we focus our attention on the early events leading to liver cancer. We compared the gene expression profile of 3-month-old transgenic mice with that of 3-month-old wild-type (wt) animals. In the transgenic mouse, microarray data analysis showed a total of 45 significantly differentially expressed genes, 25 highly expressed (fold change > or =2; P = 0.0025), and 20 downregulated (fold change < or =0.5; P = 0.0025). These genes belong to several different functional categories such as the regulation of immunological response, transcription, intracellular calcium ion mobilization, regulation of cell cycle and proliferation, NF-kappab signal transduction cascades, and apoptosis. In particular, the upregulation of the antiapoptotic gene NuprI and the downregulation of the proapoptotic gene Bnip3 were found. This observation was supported by an in vitro apoptosis assay that showed downregulation of apoptosis in hepatocytes of HBV transgenic mouse compared with wt mice treated with staurosporine. In conclusion, our experimental approach allowed identification of new genes modulated by HBV and showed that the apoptotic process was deregulated in transgenic mouse hepatocytes. These data shed light on one possible mechanism by which HBV induces hepatocarcinogenesis.

Indexed as

Gene Expression Regulation, NeoplasticGene Expression Regulation, ViralLiver Neoplasms, ExperimentalAnimalsApoptosisCell Culture TechniquesCells, CulturedCell SurvivalDisease Models, AnimalGene Expression ProfilingHepatitis B virusHepatocytesMaleMiceMice, Inbred C57BLMice, TransgenicStaurosporine

Identifiers

PMID16953557
PMCPMC1578771
OpenAlexW124735902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.