ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2006
An updated 'Essex' by 'Forrest' linkage map and first composite interval map of QTL underlying six soybean traits.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.
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Who cites it
44 citing papers in PubMed, 130 citations in OpenAlex.
- QTL mapping reveals key factors related to the isoflavone contents and agronomic traits of soybean (Glycine max).BMC plant biology · 2023Article
- Genome-wide association analysis identified consistent QTL for seed yield in a soybean diversity panel tested across multiple environments.The plant genome · 2022Article
- Breeding for disease resistance in soybean: a global perspective.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Review
- The Soybean High Density 'Forrest' by 'Williams 82' SNP-Based Genetic Linkage Map Identifies QTL and Candidate Genes for Seed Isoflavone Content.Plants (Basel, Switzerland) · 2021Article
- Comparative genomic analyses of two segregating mutants reveal seven genes likely involved in resistance to Fusarium equiseti in soybean via whole genome re-sequencing.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Article
- Is Chickpea a Potential Substitute for Soybean? Phenolic Bioactives and Potential Health Benefits.International journal of molecular sciences · 2019Review
- Comprehensive RNA sequencing and co-expression network analysis to complete the biosynthetic pathway of coumestrol, a phytoestrogen.Scientific reports · 2019Article
- Article
- Mapping of new quantitative trait loci for sudden death syndrome and soybean cyst nematode resistance in two soybean populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- Integration of sudden death syndrome resistance loci in the soybean genome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Review
- Fine-mapping of QTLs for individual and total isoflavone content in soybean (Glycine max L.) using a high-density genetic map.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- 'MN1606SP' by 'Spencer' filial soybean population reveals novel quantitative trait loci and interactions among loci conditioning SDS resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Detecting the QTL-allele system of seed isoflavone content in Chinese soybean landrace population for optimal cross design and gene system exploration.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- Quantitative trait loci underlying host responses of soybean to Fusarium virguliforme toxins that cause foliar sudden death syndrome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- Article
- Mapping isoflavone QTL with main, epistatic and QTL × environment effects in recombinant inbred lines of soybean.PloS one · 2015Article
- Detecting SNPs underlying domestication-related traits in soybean.BMC plant biology · 2014Article
- Genome-wide association mapping of quantitative resistance to sudden death syndrome in soybean.BMC genomics · 2014Article
- Expression quantitative trait loci infer the regulation of isoflavone accumulation in soybean (Glycine max L. Merr.) seed.BMC genomics · 2014Article
- Quantitative trait loci analysis of individual and total isoflavone contents in soybean seeds.Journal of genetics · 2014Article
Corrections and comments
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
DNA marker maps based on single populations are the basis for gene, loci and genomic analyses. Individual maps can be integrated to produce composite maps with higher marker densities if shared marker orders are consistent. However, estimates of marker order in composite maps must include sets of markers that were not polymorphic in multiple populations. Often some of the pooled markers were not codominant, or were not correctly scored. The soybean composite map was composed of data from five separate populations based on northern US germplasm but does not yet include 'Essex' by 'Forrest' recombinant inbred line (RIL) population (E x F) or any southern US soybean cultivars. The objectives were, to update the E x F map with codominant markers, to compare marker orders among this map, the Forrest physical map and the composite soybean map and to compare QTL identified by composite interval maps to the earlier interval maps. Two hundred and thirty seven markers were used to construct the core of the E x F map. The majority of marker orders were consistent between the maps. However, 19 putative marker inversions were detected on 12 of 20 linkage groups (LG). Eleven marker distance compressions were also found. The number of inverted markers ranged from 1 to 2 per LG. Thus, marker order inversions may be common in southern compared to northern US germplasm. A total of 61 QTL among 37 measures of six traits were detected by composite interval maps, interval maps and single point analysis. Seventeen of the QTL found in composite intervals had previously been detected among the 29 QTL found in simple interval maps. The genomic locations of the known QTL were more closely delimited. A genome sequencing project to compare Southern and Northern US soybean cultivars would catalog and delimit inverted regions and the associated QTL. Gene introgression in cultivar development programs would be accelerated.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.