Evidence map›Paper›PMID 16944184›Full record

ArticleInternational journal of colorectal disease2007

Investigation of association of the DLG5 gene with phenotypes of inflammatory bowel disease in the British population.

Alexandra V Pearce, Sheila A Fisher, Natalie J Prescott, Clive M Onnie, Reenal Pattni, Peter Green, Alastair Forbes, John Mansfield, Jeremy Sanderson, Stefan Schreiber and 2 more

Abstract read
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In one paragraph

Article in International journal of colorectal disease, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Alexandra V PearceDepartment of Medical & Molecular Genetics, King's College London School of Medicine, 8th Floor Guy's Tower, Guy's Hospital, London SE1 9RT, UK.
Sheila A Fisher
Natalie J Prescott
Clive M Onnie
Reenal Pattni
Peter Green
Alastair Forbes
John Mansfield
Jeremy Sanderson
Stefan Schreiber
Cathryn M Lewis
Christopher G Mathew
Guy's Hospital · GBKing's College School · GBGuy's and St Thomas' NHS Foundation Trust · GBKiel University · DEKing's College London · GBRoyal Victoria Infirmary · GBUniversity College London · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

BACKGROUND AND

aimsMutations in the DLG5 gene are associated with an increased risk of inflammatory bowel disease (IBD) in some European populations. Initial investigation of a British IBD population showed evidence of association of one of three DLG5 variants, R30Q, in a family-based collection but not in a case-control cohort. We have now examined the association of the R30Q polymorphism in a large cohort of British IBD cases, tested for interaction between the DLG5 and CARD15 genes and assessed possible association of DLG5 with clinical features of Crohn's disease (CD) and ulcerative colitis (UC). MATERIALS AND

methodsDLG5 R30Q and the CARD15 polymorphisms, Arg702Trp, Gly908Arg and Leu1007fs were genotyped in 1,148 IBD cases and 749 controls. DLG5 R30Q was also analysed in cases stratified by CARD15 genotype, disease subtype and smoking history. RESULTS/

findingsNo significant difference in frequencies of the R30Q variant was observed between IBD cases (9.9%) and controls (10.1%) or in cases analysed separately as CD and UC. There was also no significant difference in the frequency of R30Q between CD cases carrying risk-associated CARD15 alleles and those that did not. The frequency of R30Q was higher in CD cases with ileal disease than cases without (p=0.042) and higher in CD cases who had smoked than in nonsmokers (p=0.009). INTERPRETATION/

conclusionThe R30Q variant in the DLG5 gene does not appear to be associated with an overall increase in the risk of disease in a British IBD cohort, but differences in its frequency in subgroups of CD patients warrant further investigation.

Indexed as

Polymorphism, GeneticCase-Control StudiesCohort StudiesColitis, UlcerativeCrohn DiseaseEnglandGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansInflammatory Bowel DiseasesMembrane ProteinsPhenotypeSmokingTumor Suppressor ProteinsDLG5 protein, humanMembrane ProteinsTumor Suppressor Proteins

Identifiers

PMID16944184
OpenAlexW2034737470

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.