Evidence map›Paper›PMID 16940174›Full record

ArticleMolecular and cellular biology2006

DDB1 maintains genome integrity through regulation of Cdt1.

Courtney A Lovejoy, Kimberli Lock, Ashwini Yenamandra, David Cortez

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
  2. Interaction of DDB1 with NBS1 in a DNA Damage Checkpoint Pathway.International journal of molecular sciences · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Regulation of Mammalian DNA Replication via the Ubiquitin-Proteasome System.Advances in experimental medicine and biology · 2017
    Review
  13. Article
  14. Article
  15. Article
  16. Regulating DNA replication in eukarya.Cold Spring Harbor perspectives in biology · 2013
    Review
  17. Article
  18. Article
  19. Article
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Courtney A LovejoyDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37232, USA.
Kimberli Lock
Ashwini Yenamandra
David Cortez
Vanderbilt University · US

Funding

Function of the ATR-ATRIP ComplexR01CA102729 · NCI · VANDERBILT UNIVERSITY · PI CORTEZ, DAVID K · 2003 to 2018
$4.2M
NCI NIH HHS R01 CA102729
6 · The paper itself

Abstract

DDB1, a component of a Cul4A ubiquitin ligase complex, promotes nucleotide excision repair (NER) and regulates DNA replication. We have investigated the role of human DDB1 in maintaining genome stability. DDB1-depleted cells accumulate DNA double-strand breaks in widely dispersed regions throughout the genome and have activated ATM and ATR cell cycle checkpoints. Depletion of Cul4A yields similar phenotypes, indicating that an E3 ligase function of DDB1 is important for genome maintenance. In contrast, depletion of DDB2, XPA, or XPC does not cause activation of DNA damage checkpoints, indicating that defects in NER are not involved. One substrate of DDB1-Cul4A that is crucial for preventing genome instability is Cdt1. DDB1-depleted cells exhibit increased levels of Cdt1 protein and rereplication, despite containing other Cdt1 regulatory mechanisms. The rereplication, accumulation of DNA damage, and activation of checkpoint responses in DDB1-depleted cells require entry into S phase and are partially, but not completely, suppressed by codepletion of Cdt1. Therefore, DDB1 prevents DNA lesions from accumulating in replicating human cells, in part by regulating Cdt1 degradation.

Indexed as

DNA DamageGenome, HumanGenomic InstabilityAnimalsAtaxia Telangiectasia Mutated ProteinsCell CycleCell Cycle ProteinsCell LineChromosomes, HumanCullin ProteinsDNA-Binding ProteinsDNA RepairDNA ReplicationGenes, cdcHumansProtein Serine-Threonine KinasesAtaxia Telangiectasia Mutated ProteinsATM protein, humanATR protein, humanCDT1 protein, humanCell Cycle ProteinsCUL4A protein, humanCullin ProteinsDDB1 protein, humanDNA-Binding ProteinsProtein Serine-Threonine KinasesProtein SubunitsRNA, Small InterferingS-Phase Kinase-Associated ProteinsTumor Suppressor ProteinsXeroderma Pigmentosum Group A ProteinXPA protein, humanXPC protein, human

Identifiers

PMID16940174
PMCPMC1636754
OpenAlexW2123300899

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.