Evidence map›Paper›PMID 16936024›Full record

ArticleJournal of bacteriology2006

Genome rearrangements, deletions, and amplifications in the natural population of Bartonella henselae.

Hillevi Lindroos, Olga Vinnere, Alex Mira, Dirk Repsilber, Kristina Näslund, Siv G E Andersson

Abstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Article
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  4. Article
  5. Gene Transfer Agents in Symbiotic Microbes.Results and problems in cell differentiation · 2020
    Review
  6. Review
  7. Article
  8. Phylogeny and putative virulence gene analysis of Bartonella bovis.The Journal of veterinary medical science · 2018
    Article
  9. Molecular Mechanisms ofFrontiers in cellular and infection microbiology · 2018
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hillevi LindroosDepartment of Molecular Evolution, Evolutionary Biology Center, Uppsala University, Norbyvägen 18C, S-752 36 Uppsala, Sweden.
Olga Vinnere
Alex Mira
Dirk Repsilber
Kristina Näslund
Siv G E Andersson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cats are the natural host for Bartonella henselae, an opportunistic human pathogen and the agent of cat scratch disease. Here, we have analyzed the natural variation in gene content and genome structure of 38 Bartonella henselae strains isolated from cats and humans by comparative genome hybridizations to microarrays and probe hybridizations to pulsed-field gel electrophoresis (PFGE) blots. The variation in gene content was modest and confined to the prophage and the genomic islands, whereas the PFGE analyses indicated extensive rearrangements across the terminus of replication with breakpoints in areas of the genomic islands. We observed no difference in gene content or structure between feline and human strains. Rather, the results suggest multiple sources of human infection from feline B. henselae strains of diverse genotypes. Additionally, the microarray hybridizations revealed DNA amplification in some strains in the so-called chromosome II-like region. The amplified segments were centered at a position corresponding to a putative phage replication initiation site and increased in size with the duration of cultivation. We hypothesize that the variable gene pool in the B. henselae population plays an important role in the establishment of long-term persistent infection in the natural host by promoting antigenic variation and escape from the host immune response.

Indexed as

Genome, BacterialSequence DeletionAnimalsBartonella henselaeCatsCat-Scratch DiseaseChromosomes, BacterialCluster AnalysisDNA, BacterialDNA FingerprintingElectrophoresis, Gel, Pulsed-FieldGene RearrangementGenomic IslandsHumansMolecular Sequence DataNucleic Acid HybridizationDNA, Bacterial

Identifiers

PMID16936024
PMCPMC1636255

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.