Evidence map›Paper›PMID 16935947›Full record

ArticleBiophysical journal2006

Methods for detecting internalized, FM 1-43 stained particles in epithelial cells and monolayers.

C A Bertrand, C Laboisse, U Hopfer, R J Bridges, R A Frizzell

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. mBio · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

C A BertrandDepartment of Cell Biology and Physiology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA. cbertra@pitt.edu
C Laboisse
U Hopfer
R J Bridges
R A Frizzell
University of Pittsburgh · USCase Western Reserve University · USInserm · FR

Funding

Translational StudiesP30DK072506 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PILEWSKI, JOSEPH MARK · 2005 to 2017
$12.5M
Co-chaperone Actions in CFTR BiogenesisR01DK068196 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GOETZMAN, ERIC S · 2004 to 2024
$5.8M
DHEA--PPAR DEPENDENT &INDEPENDENT MECHANISMS OF ACTIONR01DK054774 · NIDDK · UNIVERSITY OF LOUISVILLE · PI PROUGH, RUSSELL ALLEN · 1999 to 2006
$1.8M
CELL PHYSIOLOGY TRAINING PROGRAMT32DK007678 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI HOPFER, ULRICH · 1991 to 2005
$1.6M
NIDDK NIH HHS DK07678NIDDK NIH HHS DK54774NIDDK NIH HHS DK72506NIDDK NIH HHS P30 DK072506NIDDK NIH HHS R01 DK054774NIDDK NIH HHS R01 DK068196NIDDK NIH HHS T32 DK007678
6 · The paper itself

Abstract

The membrane dye FM 1-43 has frequently been used to quantify exocytosis in neurons. In epithelia, intense lateral intracellular space staining and fluctuations in baseline labeling produced inconsistent results. Membrane retrieved in the presence of FM 1-43 retains the dye, however, and cells that undergo compensatory endocytosis during and following evoked exocytosis contain punctate, fluorescent particles after washout of external stain. As an alternative measure of trafficking, we quantified the fluorescent puncta retained after dye washout and tested our method on both coverslip-grown cell clusters and filter-grown intact monolayers. Images for analysis were acquired using serial sectioning with either epifluorescence or confocal microscopy. Tests with an intestinal goblet cell line that exhibits basal and ATP-stimulated granule trafficking confirmed that 1), the algorithm identified the same number of internalized particles with either epifluorescence or confocal microscopy acquired images; 2), low density clusters exhibited significantly more internalized particles per cell than either filter-grown monolayers or high density clusters; 3), ATP stimulation significantly increased the number of internalized particles in all preparations; and 4), the number of particles internalized was comparable to capacitance measurements of exocytosis. This method provides a single technique for quantifying membrane trafficking in both monolayers and unpolarized cells.

Indexed as

Pyridinium CompoundsQuaternary Ammonium CompoundsCell LineEpithelial CellsExocytosisHumansLuminescent MeasurementsMicroscopy, FluorescenceStaining and LabelingFM1 43Pyridinium CompoundsQuaternary Ammonium Compounds

Identifiers

PMID16935947
PMCPMC1630457
OpenAlexW1985379483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.