Evidence map›Paper›PMID 16933975›Full record

ArticlePLoS biology2006

Dorsoventral patterning in hemichordates: insights into early chordate evolution.

Christopher J Lowe, Mark Terasaki, Michael Wu, Robert M Freeman, Linda Runft, Kristen Kwan, Saori Haigo, Jochanan Aronowicz, Eric Lander, Chris Gruber and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 128 papers.

0numbers the graph read from it
0cells of the map it votes in
128citing papers in PubMed
17.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

128 citing papers in PubMed, 397 citations in OpenAlex.

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  16. Evolution of behavioural control from chordates to primates.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
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68 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 1 country.

Christopher J LoweDepartment of Organismal Biology and Anatomy, University of Chicago, Chicago, Illinois, United States of America.
Mark Terasaki
Michael Wu
Robert M Freeman
Linda Runft
Kristen Kwan
Saori Haigo
Jochanan Aronowicz
Eric Lander
Chris Gruber
Mark Smith
Marc Kirschner
John Gerhart
Center for Systems Biology · USUniversity of California, Berkeley · USUniversity of Chicago · USBroad Institute · USHarvard University · USUConn Health · USUniversity of California, Santa Barbara · US

Funding

DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007491 · NICHD · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI James Alan Gagnon, Kristen M Kwan · 1995 to 2026
$8.0M
DEVELOPMENTAL CIRCUITS IN GASTRULATION AND NEURULATIONR01HD037277 · NICHD · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI KIRSCHNER, MARC WALLACE · 1999 to 2008
$4.5M
Hemichordates and the Origin of ChordatesR01HD042724 · NICHD · UNIVERSITY OF CALIFORNIA BERKELEY · PI GERHART, JOHN C · 2002 to 2009
$1.7M
NICHD NIH HHS HD37277NICHD NIH HHS HD42724NICHD NIH HHS R01 HD037277NICHD NIH HHS R01 HD042724NICHD NIH HHS T32 HD007491
6 · The paper itself

Abstract

We have compared the dorsoventral development of hemichordates and chordates to deduce the organization of their common ancestor, and hence to identify the evolutionary modifications of the chordate body axis after the lineages split. In the hemichordate embryo, genes encoding bone morphogenetic proteins (Bmp) 2/4 and 5/8, as well as several genes for modulators of Bmp activity, are expressed in a thin stripe of ectoderm on one midline, historically called "dorsal." On the opposite midline, the genes encoding Chordin and Anti-dorsalizing morphogenetic protein (Admp) are expressed. Thus, we find a Bmp-Chordin developmental axis preceding and underlying the anatomical dorsoventral axis of hemichordates, adding to the evidence from Drosophila and chordates that this axis may be at least as ancient as the first bilateral animals. Numerous genes encoding transcription factors and signaling ligands are expressed in the three germ layers of hemichordate embryos in distinct dorsoventral domains, such as pox neuro, pituitary homeobox, distalless, and tbx2/3 on the Bmp side and netrin, mnx, mox, and single-minded on the Chordin-Admp side. When we expose the embryo to excess Bmp protein, or when we deplete endogenous Bmp by small interfering RNA injections, these expression domains expand or contract, reflecting their activation or repression by Bmp, and the embryos develop as dorsalized or ventralized limit forms. Dorsoventral patterning is independent of anterior/posterior patterning, as in Drosophila but not chordates. Unlike both chordates and Drosophila, neural gene expression in hemichordates is not repressed by high Bmp levels, consistent with their development of a diffuse rather than centralized nervous system. We suggest that the common ancestor of hemichordates and chordates did not use its Bmp-Chordin axis to segregate epidermal and neural ectoderm but to pattern many other dorsoventral aspects of the germ layers, including neural cell fates within a diffuse nervous system. Accordingly, centralization was added in the chordate line by neural-epidermal segregation, mediated by the pre-existing Bmp-Chordin axis. Finally, since hemichordates develop the mouth on the non-Bmp side, like arthropods but opposite to chordates, the mouth and Bmp-Chordin axis may have rearranged in the chordate line, one relative to the other.

Indexed as

Biological EvolutionBody PatterningAnimalsBone Morphogenetic ProteinsChordata, NonvertebrateGene Expression Regulation, DevelopmentalGlycoproteinsIntercellular Signaling Peptides and ProteinsBone Morphogenetic ProteinschordinGlycoproteinsIntercellular Signaling Peptides and Proteins

Identifiers

PMID16933975
PMCPMC1551926
OpenAlexW2129829180

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.